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Adaptive prior probability and spatial temporal intensity change estimation for segmentation of the one-year-old human brain

机译:一岁人脑分割的自适应现有概率和空间时间强度变化估计

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摘要

The degree of white matter (WM) myelination is rather inhomogeneous across the brain. White matter appears differently across the cortical lobes in MR images acquired during early postnatal development. Specifically at 1-year of age, the gray/white matter contrast of MR T1 and T2 weighted images in prefrontal and temporal lobes is reduced as compared to the rest of the brain, and thus, tissue segmentation results commonly show lower accuracy in these lobes. In this novel work, we propose the use of spatial intensity growth maps (IGM) for T1 and T2 weighted images to compensate for local appearance inhomogeneity. The IGM captures expected intensity changes from 1 to 2 years of age, as appearance homogeneity is greatly improved by the age of 24 months. The IGM was computed as the coefficient of a voxel-wise linear regression model between corresponding intensities at 1 and 2 years. The proposed IGM method revealed low regression values of 1–10% in GM and CSF regions, as well as in WM regions at maturation stage of myelination at 1 year. However, in the prefrontal and temporal lobes we observed regression values of 20–25%, indicating that the IGM appropriately captures the expected large intensity change in these lobes mainly due to myelination. The IGM is applied to cross-sectional MRI datasets of 1-year-old subjects via registration, correction and tissue segmentation of the IGM-corrected dataset. We validated our approach in a small leave-one-out study of images with known, manual ‘ground truth’ segmentations.
机译:大脑中白质(WM)的髓鞘化程度相当不均匀。在产后早期获得的MR图像中,大脑皮质叶上的白质出现不同。特别是在1岁时,前额叶和颞叶的MR T1和T2加权图像的灰/白对比度与大脑其他部位相比降低了,因此,组织分割结果通常显示这些叶的准确性较低。在这项新颖的工作中,我们建议对T1和T2加权图像使用空间强度增长图(IGM),以补偿局部外观的不均匀性。 IGM捕获了从1到2岁的预期强度变化,因为外观均匀性在24个月大时已大大改善。 IGM被计算为1年和2年相应强度之间的体素线性回归模型的系数。提议的IGM方法显示,在1年的髓鞘成熟阶段,GM和CSF区域以及WM区域的回归值较低,仅为1-10%。然而,在前额叶和颞叶中,我们观察到回归值为20–25%,这表明IGM适当地捕获了这些叶中预期的大强度变化,这主要是由于髓鞘形成。通过将IGM校正后的数据集进行配准,校正和组织分割,将IGM应用于1岁受试者的MRI横截面数据集。我们通过对已知的手动“地面真相”分割进行图像的小型留一法研究,验证了我们的方法。

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