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Evolving the Myoglobin Cytochrome b5 Complex from Dynamic Toward Simple Docking: Charging the Electron-Transfer Reactive Patch

机译:不断发展的肌红蛋白细胞色素b从动态复杂走向简单对接:充电的电子转移反应补丁

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摘要

We describe photo-initiated electron transfer (ET) from a suite of Zn-substituted myoglobin (1Mb) variants to cytochrome b5 (b5). An electrostatic interface redesign strategy has led to the introduction of positive charges in the vicinity of the heme edge through D/E → K charge-reversal mutation combinations at `hotspot' residues (D44, D60, E85), augmented by the elimination of negative charges from Mb or b5 by neutralization of heme propionates. These variations create an unprecedentedly large range in the product of the ET partners' total charges: −5 < −qMbqb5 < 40. The binding affinity (Ka) increases a thousand-fold as −qMbqb5 increases through this range, and exhibits a surprisingly simple, exponential dependence on −qMbqb5. This is explained in terms of electrostatic interactions between a `charged reactive patch' (crp) on each partner's surface, defined as a compact region around the heme edge that (i) contains the total protein charge of each variant, and (ii) encompasses a major fraction of the `reactive region' (Rr) comprising surface atoms with large matrix elements for electron tunneling to the heme. As −qMbqb5 increases, the complex undergoes a transition from fast to slow exchange dynamics on the triplet ET timescale, with a correlated progression in the rate constants for intracomplex (ket) and bimolecular (k2) ET. This progression is analyzed by integrating the crp and Rr descriptions of ET into the textbook steady-state treatment of reversible binding between partners that undergo intracomplex ET, and found to encompass the full range of behaviors predicted by the model. The generality of this approach is demonstrated by applying it to the extensive body of data for the ET complex between the photosynthetic reaction center and cytochrome c2. Deviations from this model also are discussed.
机译:我们描述了从一组锌取代的肌红蛋白(1Mb)变体到细胞色素b5(b5)的光引发电子转移(ET)。静电接口的重新设计策略通过在“热点”残基(D44,D60,E85)处通过D / E→K电荷反转突变组合,在血红素边缘附近引入正电荷,并通过消除负电荷来增强通过中和血红素丙酸酯产生的Mb或b5电荷。这些变化在ET合作伙伴的总费用乘积中创造了前所未有的大范围:−5 <-qMbqb5 <40。随着-qMbqb5在此范围内增加,结合亲和力(Ka)增加千倍,并且表现出令人惊讶的简单,对-qMbqb5呈指数依赖性。这是根据每个伴侣表面上的“带电反应性贴剂”(crp)之间的静电相互作用来解释的,定义为围绕血红素边缘的紧密区域,其中( i )包含每个蛋白的总蛋白质电荷变体,( ii )涵盖了大部分的“反应区”( Rr ),其中包括具有大基质元素的表面原子,用于电子隧穿至血红素。随着- q Mb q b5 的增加,复合物在三重态ET时间尺度上经历从快速交换动力学到缓慢交换动力学的转变,并具有相关的进展复杂(ket)和双分子(k2)ET的速率常数。通过将ET的crp和Rr描述集成到接受内部复杂ET的伴侣之间可逆结合的教科书稳态处理中,分析了这种进展,发现该模型涵盖了模型预测的全部行为。通过将该方法应用于光合作用中心和细胞色素 c 2 之间的ET络合物的大量数据,证明了该方法的普遍性。还讨论了与该模型的偏差。

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