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A Common Trinucleotide Repeat Expansion within the Transcription Factor 4 (TCF4 E2-2) Gene Predicts Fuchs Corneal Dystrophy

机译:转录因子4(TCF4E2-2)基因内的普通的三核苷酸重复扩展预言Fuchs的角膜营养不良

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摘要

Fuchs endothelial corneal dystrophy (FECD) is a common, familial disease of the corneal endothelium and is the leading indication for corneal transplantation. Variation in the transcription factor 4 (TCF4) gene has been identified as a major contributor to the disease. We tested for an association between an intronic TGC trinucleotide repeat in TCF4 and FECD by determining repeat length in 66 affected participants with severe FECD and 63 participants with normal corneas in a 3-stage discovery/replication/validation study. PCR primers flanking the TGC repeat were used to amplify leukocyte-derived genomic DNA. Repeat length was determined by direct sequencing, short tandem repeat (STR) assay and Southern blotting. Genomic Southern blots were used to evaluate samples for which only a single allele was identified by STR analysis. Compiling data for 3 arms of the study, a TGC repeat length >50 was present in 79% of FECD cases and in 3% of normal controls cases (p<0.001). Among cases, 52 of 66 (79%) subjects had >50 TGC repeats, 13 (20%) had <40 repeats and 1 (2%) had an intermediate repeat length. In comparison, only 2 of 63 (3%) unaffected control subjects had >50 repeats, 60 (95%) had <40 repeats and 1 (2%) had an intermediate repeat length. The repeat length was greater than 1000 in 4 FECD cases. The sensitivity and specificity of >50 TGC repeats identifying FECD in this patient cohort was 79% and 96%, respectively Expanded TGC repeat was more specific for FECD cases than the previously identified, highly associated, single nucleotide polymorphism, rs613872 (specificity = 79%). The TGC trinucleotide repeat expansion in TCF4 is strongly associated with FECD, and a repeat length >50 is highly specific for the disease This association suggests that trinucleotide expansion may play a pathogenic role in the majority of FECD cases and is a predictor of disease risk.
机译:Fuchs内皮角膜营养不良(FECD)是一种常见的家族性角膜内皮疾病,是角膜移植的主要指征。转录因子4(TCF4)基因的变异已被确定为该疾病的主要诱因。在三阶段发现/复制/验证研究中,我们通过确定66位严重FECD患病参与者和63位正常角膜参与者的重复长度,来测试TCF4中内含性TGC三核苷酸重复与FECD之间的关联。 TGC重复序列两侧的PCR引物用于扩增白细胞衍生的基因组DNA。通过直接测序,短串联重复(STR)测定和Southern印迹确定重复长度。基因组Southern印迹用于评估通过STR分析仅鉴定出一个等位基因的样品。汇总研究的3组数据,在79%的FECD病例和3%的正常对照病例中,TGC重复长度大于50。(p <0.001)。在这些案例中,66名受试者中的52名(79%)的重复重复次数> 50,13名(20%)的重复次数少于40次,其中1名(2%)的重复长度中等。相比之下,在63个未受影响的对照组中,只有2个(3%)重复次数大于50,60(95%)个重复次数小于40,1(2%)的重复长度中等。 4例FECD病例的重复长度大于1000。在该患者队列中,鉴定出FECD的> 50个TGC重复序列的敏感性和特异性分别为79%和96%,扩展的TGC重复序列对于FECD病例比先前鉴定的高度相关的单核苷酸多态性rs613872更特异性(特异性= 79% )。 TCF4中的TGC三核苷酸重复扩增与FECD密切相关,重复长度> 50对该疾病具有高度特异性。这种关联性表明三核苷酸扩增可能在大多数FECD病例中发挥致病作用,并且是疾病风险的预测因子。

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