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Application of a New Dual Localization-Affinity Purification Tag Reveals Novel Aspects of Protein Kinase Biology in Aspergillus nidulans

机译:新的双重定位亲和纯化标签的应用揭示了构巢曲霉中蛋白激酶生物学的新方面。

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摘要

Filamentous fungi occupy critical environmental niches and have numerous beneficial industrial applications but devastating effects as pathogens and agents of food spoilage. As regulators of essentially all biological processes protein kinases have been intensively studied but how they regulate the often unique biology of filamentous fungi is not completely understood. Significant understanding of filamentous fungal biology has come from the study of the model organism Aspergillus nidulans using a combination of molecular genetics, biochemistry, cell biology and genomic approaches. Here we describe dual localization-affinity purification (DLAP) tags enabling endogenous N or C-terminal protein tagging for localization and biochemical studies in A. nidulans. To establish DLAP tag utility we endogenously tagged 17 protein kinases for analysis by live cell imaging and affinity purification. Proteomic analysis of purifications by mass spectrometry confirmed association of the CotA and NimXCdk1 kinases with known binding partners and verified a predicted interaction of the SldABub1/R1 spindle assembly checkpoint kinase with SldBBub3. We demonstrate that the single TOR kinase of A. nidulans locates to vacuoles and vesicles, suggesting that the function of endomembranes as major TOR cellular hubs is conserved in filamentous fungi. Comparative analysis revealed 7 kinases with mitotic specific locations including An-Cdc7 which unexpectedly located to mitotic spindle pole bodies (SPBs), the first such localization described for this family of DNA replication kinases. We show that the SepH septation kinase locates to SPBs specifically in the basal region of apical cells in a biphasic manner during mitosis and again during septation. This results in gradients of SepH between G1 SPBs which shift along hyphae as each septum forms. We propose that SepH regulates the septation initiation network (SIN) specifically at SPBs in the basal region of G1 cells and that localized gradients of SIN activity promote asymmetric septation.
机译:丝状真菌占据了关键的环境利基,并​​具有许多有益的工业应用,但是作为病原体和食物变质的诱因却具有毁灭性的作用。作为基本上所有生物过程的调节剂,已经深入研究了蛋白激酶,但是它们如何调节丝状真菌通常独特的生物学机制尚不完全清楚。通过结合分子遗传学,生物化学,细胞生物学和基因组学方法对模式生物构巢曲霉的研究,对丝状真菌生物学有了重要的了解。在这里,我们描述双重定位亲和纯化(DLAP)标签,使内源性N或C端蛋白标签能够用于构巢曲霉的定位和生化研究。为了建立DLAP标签实用程序,我们内源标记了17种蛋白激酶,以通过活细胞成像和亲和纯化进行分析。通过质谱进行蛋白质组学分析,确认了CotA和NimX Cdk1 激酶与已知结合配偶体的缔合,并验证了SldA Bub1 / R1 纺锤体装配检查点激酶与蛋白的预测相互作用SldB Bub3 。我们证明,构巢曲霉的单个TOR激酶位于液泡和囊泡,表明作为主要TOR细胞集线器的内膜功能在丝状真菌中是保守的。比较分析揭示了7种具有有丝分裂特定位置的激酶,包括An-Cdc7,它意外地位于有丝分裂纺锤体极体(SPB)上,这是针对该DNA复制激酶家族的第一个此类定位。我们显示,SepH分隔激酶在有丝分裂期间和分隔期间再次以双相方式定位于SPBs,特别是在顶细胞的基础区域中。这导致G1 SPB之间的SepH梯度随着每个隔垫的形成而沿菌丝移动。我们建议SepH调节septation起始网络(SIN)专门在G1细胞基础区域的SPB处,并且SIN活性的局部梯度会促进不对称的septation。

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