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Front line defenders of the ecological niche! Screening the structural diversity of peptaibiotics from saprotrophic and fungicolous Trichoderma/Hypocrea species

机译:生态位的前线捍卫者!从腐生和真菌木霉菌/矮生菌中筛选肽类抗生素的结构多样性

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摘要

Approximately 950 individual sequences of non-ribosomally biosynthesised peptides are produced by the genus Trichoderma/Hypocrea that belong to a perpetually growing class of mostly linear antibiotic oligopeptides, which are rich in the non-proteinogenic α-aminoisobutyric acid (Aib). Thus, they are comprehensively named peptaibiotics. Notably, peptaibiotics represent ca. 80 % of the total inventory of secondary metabolites currently known from Trichoderma/Hypocrea. Their unique membrane-modifying bioactivity results from amphipathicity and helicity, thus making them ideal candidates in assisting both colonisation and defence of the natural habitats by their fungal producers. Despite this, reports on the in vivo-detection of peptaibiotics have scarcely been published in the past. In order to evaluate the significance of peptaibiotic production for a broader range of potential producers, we screened nine specimens belonging to seven hitherto uninvestigated fungicolous or saprotrophic Trichoderma/Hypocrea species by liquid chromatography coupled to electrospray high resolution mass spectrometry. Sequences of peptaibiotics found were independently confirmed by analysing the peptaibiome of pure agar cultures obtained by single-ascospore isolation from the specimens. Of the nine species examined, five were screened positive for peptaibiotics. A total of 78 peptaibiotics were sequenced, 56 (=72 %) of which are new. Notably, dihydroxyphenylalaninol and O-prenylated tyrosinol, two C-terminal residues, which have not been reported for peptaibiotics before, were found as well as new and recurrent sequences carrying the recently described tyrosinol residue at their C-terminus. The majority of peptaibiotics sequenced are 18- or 19-residue peptaibols. Structural homologies with ‘classical representatives’ of subfamily 1 (SF1)-peptaibiotics argue for the formation of transmembrane ion channels, which are prone to facilitate the producer capture and defence of its substratum.
机译:木霉属/ hypocrea属产生了大约950个非核糖体生物合成肽的单个序列,这些肽属于永生类的大部分线性抗生素寡肽,富含非蛋白源性α-氨基异丁酸(Aib)。因此,它们被统称为肽抗菌素。值得注意的是,肽抗生素代表约。目前从木霉属/ hypocrea中已知的次级代谢产物总量的80%。它们独特的膜修饰生物活性来自两亲性和螺旋性,因此使其成为理想的候选者,可帮助其真菌生产者在自然栖息地的定居和防御中发挥作用。尽管如此,过去几乎没有关于肽酶的体内检测的报道。为了评估肽菌素生产对于更广泛的潜在生产者的重要性,我们通过液相色谱-电喷雾高分辨率质谱法筛选了九种标本,这些标本属于迄今尚未调查的7种真菌或腐生木霉菌/增生菌属物种。通过分析从样品中单孢子孢子分离获得的纯琼脂培养物的肽生物组,可独立确定发现的肽类抗生素序列。在检查的9个物种中,有5个筛查出的肽抗生素呈阳性。总共对78种肽类抗生素进行了测序,其中56种(= 72%)是新的。值得注意的是,发现了以前尚未报道过肽抗生素的两个C-末端残基二羟基苯丙氨醇和O-戊烯基化的酪氨醇,以及在它们的C-末端带有最近描述的酪氨酸残基的新序列和重复序列。测序的大多数肽生物素是18或19个残基的肽醇。与亚家族1(SF1)-peptaibiotics的“经典代表”的结构同源性主张跨膜离子通道的形成,该通道易于促进生产者捕获和防御其基质。

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