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Determination of partial molar volumes from free energy perturbation theory

机译:根据自由能微扰理论确定部分摩尔体积

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摘要

Partial molar volume is an important thermodynamic property that gives insights into molecular size and intermolecular interactions in solution. Theoretical frameworks for determining the partial molar volume (V°) of a solvated molecule generally apply Scaled Particle Theory or Kirkwood–Buff theory. With the current abilities to perform long molecular dynamics and Monte Carlo simulations, more direct methods are gaining popularity, such as computing V° directly as the difference in computed volume from two simulations, one with a solute present and another without. Thermodynamically, V° can also be determined as the pressure derivative of the free energy of solvation in the limit of infinite dilution. Both approaches are considered herein with the use of free energy perturbation (FEP) calculations to compute the necessary free energies of solvation at elevated pressures. Absolute and relative partial molar volumes are computed for benzene and benzene derivatives using the OPLS-AA force field. The mean unsigned error for all molecules is 2.8 cm3 mol−1. The present methodology should find use in many contexts such as the development and testing of force fields for use in computer simulations of organic and biomolecular systems, as a complement to related experimental studies, and to develop a deeper understanding of solute–solvent interactions.
机译:部分摩尔体积是重要的热力学性质,可洞悉溶液中的分子大小和分子间相互作用。用于确定溶剂化分子的部分摩尔体积(V°)的理论框架通常采用比例粒子理论或柯克伍德–巴夫理论。由于具有执行长分子动力学和蒙特卡洛模拟的当前能力,更直接的方法越来越受欢迎,例如直接计算V°作为两次模拟的计算量之差,一次模拟存在溶质,另一次没有溶质。在热力学上,也可以将V°确定为无限稀释范围内的溶剂化自由能的压力导数。在本文中考虑使用自由能扰动(FEP)计算来计算在升高的压力下必要的溶剂化自由能的两种方法。使用OPLS-AA力场计算苯和苯衍生物的绝对和相对部分摩尔体积。所有分子的平均无符号误差为2.8 cm 3 mol -1 。本方法学应在许多情况下找到用处,例如用于有机和生物分子系统的计算机模拟的力场的开发和测试,作为相关实验研究的补充,并加深对溶质-溶剂相互作用的了解。

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