首页> 美国卫生研究院文献>other >Histidine Orientation Modulates the Structure and Dynamics of a de Novo Metalloenzyme Active Site
【2h】

Histidine Orientation Modulates the Structure and Dynamics of a de Novo Metalloenzyme Active Site

机译:组氨酸的方向调节从头金属酶活性位点的结构和动力学。

代理获取
本网站仅为用户提供外文OA文献查询和代理获取服务,本网站没有原文。下单后我们将采用程序或人工为您竭诚获取高质量的原文,但由于OA文献来源多样且变更频繁,仍可能出现获取不到、文献不完整或与标题不符等情况,如果获取不到我们将提供退款服务。请知悉。

摘要

The ultrafast dynamics of a de novo metalloenzyme active site is monitored using two-dimensional infrared spectroscopy. The homotrimer of parallel, coiled coil α-helices contains a His3-Cu(I) metal site where CO is bound and serves as a vibrational probe of the hydrophobic interior of the self-assembled complex. The ultrafast spectral dynamics of Cu-CO reveals unprecedented ultrafast (2 ps) nonequilibrium structural rearrangements launched by vibrational excitation of CO. This initial rapid phase is followed by much slower ~40 ps vibrational relaxation typical of metal-CO vibrations in natural proteins. To identify the hidden coupled coordinate, small molecule analogues and the full peptide were studied by QM and QM/MM calculations, respectively. The calculations show that variation of the histidines’ dihedral angles in coordinating Cu controls the coupling between the CO stretch and the Cu–C–O bending coordinates. Analysis of different optimized structures with significantly different electrostatic field magnitudes at the CO ligand site indicates that the origin of the stretch–bend coupling is not directly due to through-space electrostatics. Instead, the large, ~3.6 D dipole moments of the histidine side chains effectively transduce the electrostatic environment to the local metal coordination orientation. The sensitivity of the first coordination sphere to the protein electrostatics and its role in altering the potential energy surface of the bound ligands suggests that long-range electrostatics can be leveraged to fine-tune function through enzyme design.
机译:使用二维红外光谱法监测从头金属酶活性位点的超快动力学。平行的,盘绕的螺旋α-螺旋的均三聚物包含一个His3-Cu(I)金属位点,CO被结合在该位点上,并用作自组装复合物疏水内部的振动探针。 Cu-CO的超快光谱动力学揭示了由CO的振动激发引起的空前的超快(2 ps)非平衡结构重排。在此初始快速阶段之后,天然蛋白质中金属-CO振动所特有的慢得多的〜40 ps振动弛豫。为了识别隐藏的偶联坐标,分别通过QM和QM / MM计算研究了小分子类似物和完整肽。计算表明,组氨酸在铜配合中的二面角的变化控制了CO拉伸和Cu–C–O弯曲坐标之间的耦合。对在CO配体位点具有明显不同的静电场强度的不同优化结构的分析表明,拉伸-弯曲耦合的起源不是直接由于贯穿空间的静电。相反,组氨酸侧链的〜3.6 D大偶极矩可有效地将静电环境转换为局部金属配位取向。第一个配位球对蛋白质静电的敏感性及其在改变结合配体的势能表面中的作用表明,可以利用远距离静电来通过酶设计来微调功能。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
代理获取

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号