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BsmI ApaI and TaqI Polymorphisms in the Vitamin D Receptor Gene (VDR) and Association with Lumbar Spine Pathologies: An Italian Case-Control Study

机译:维生素D受体基因(VDR)中的BsmIApaI和TaqI多态性及其与腰椎病理的关联:一项意大利病例对照研究

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摘要

Three adjacent single nucleotide polymorphisms of the vitamin D receptor gene (VDR) BsmI (rs1544410), ApaI (rs7975232), and TaqI (rs731236) are commonly studied in several pathologies. We aimed to evaluate the distribution of VDR BsmI, ApaI, and TaqI allele, genotype, and haplotype frequencies in an Italian cohort of 266 patients with lumbar spine disorders assessed by Magnetic Resonance Imaging and 252 asymptomatic controls. The exposure to putative risk factors was evaluated by a questionnaire. Polymorphisms were detected by PCR-RFLP and TaqMan® SNP Genotyping Assay. The results were statistically adjusted for the identified conventional risk factors. The three SNPs were in linkage disequilibrium. For all cases BbAaTT was a 3-fold risk factor OR = 3.38), whereas bbAATT (OR = 0.22), and bbaaTT (OR = 0.47) genotypes were found to be protective. Specifically, for patients affected by disc herniation only (n = 88) and all lumbar pathologies excluding stenosis and/or spondylolistesis (n = 215) B allele, Bb, Aa, and BbAaTT genotypes were risky, whereas b allele, bb, aa, and bbaaTT genotypes were protective. In patients affected by osteochondrosis with or without disc hernation (n = 50), T allele, Aa, and bbAaTT genotypes were risky, whereas t allele, AA, tt genotypes were protective. In patients affected by stenosis and/or spondylolistesis (n = 51) no significant associations were found. This is the first study showing an association of the three genetic VDR variants BsmI, ApaI, and TaqI and lumbar spine pathologies. Our study contributes to delineate genetic risk factors for specific subgroups of patients with lumbar spine pathologies highlighting the importance of haplotype analysis, and of detailed clinical evaluation of the patients for identification of genetic biomarkers.
机译:维生素D受体基因(VDR)BsmI(rs1544410),ApaI(rs7975232)和TaqI(rs731236)的三个相邻的单核苷酸多态性通常在几种病理中进行研究。我们旨在评估磁共振成像和252个无症状对照对266名腰椎疾病患者的意大利队列中VDR BsmI,ApaI和TaqI等位基因的分布,基因型和单倍型频率。通过问卷评估假定的风险因素暴露。用PCR-RFLP和TaqMan ® SNP基因分型检测多态性。对于确定的常规危险因素,对结果进行统计学调整。这三个SNP处于连锁不平衡状态。在所有情况下,BbAaTT的危险因素均为3倍,OR = 3.38),而bbAATT(OR = 0.22)和bbaaTT(OR = 0.47)基因型具有保护性。具体来说,对于仅受椎间盘突出症(n = 88)和所有腰椎病变(不包括狭窄和/或脊椎滑脱)(n = 215)影响的患者,B等位基因,Bb,Aa和BbAaTT基因型具有风险,而b等位基因,bb,aa,和bbaaTT基因型具有保护作用。在患有或不患有椎间盘突出症的骨软骨病患者中(n = 50),T等位基因,Aa和bbAaTT基因型具有风险,而 t 等位基因, AA tt 基因型具有保护性。在受狭窄和/或脊椎滑脱影响的患者中(n = 51),未发现显着关联。这是第一项研究,显示了三种遗传 VDR 变异BsmI,ApaI和TaqI与腰椎病理的关联。我们的研究有助于勾勒出腰椎病患特定亚组的遗传危险因素,从而突出了单倍型分析的重要性以及对患者进行详细的临床评估以鉴定遗传生物标志物的重要性。

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