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Genome-Wide Investigation of WRKY Transcription Factors Involved in Terminal Drought Stress Response in Common Bean

机译:普通豆终末干旱胁迫响应中涉及的WRKY转录因子的全基因组研究

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摘要

WRKY transcription factor plays a key role in drought stress. However, the characteristics of the WRKY gene family in the common bean (Phaseolus vulgaris L.) are unknown. In this study, we identified 88 complete WRKY proteins from the draft genome sequence of the “” common bean. The predicted genes were non-randomly distributed in all chromosomes. Basic information, amino acid motifs, phylogenetic tree and the expression patterns of PvWRKY genes were analyzed, and the proteins were classified into groups 1, 2, and 3. Group 2 was further divided into five subgroups: 2a, 2b, 2c, 2d, and 2e. Finally, we detected 19 WRKY genes that were responsive to drought stress using qRT-PCR; 11 were down-regulated, and 8 were up-regulated under drought stress. This study comprehensively examines WRKY proteins in the common bean, a model food legume, and it provides a foundation for the functional characterization of the WRKY family and opportunities for understanding the mechanisms of drought stress tolerance in this plant.
机译:WRKY转录因子在干旱胁迫中起关键作用。然而,在普通豆(菜豆)中WRKY基因家族的特征是未知的。在这项研究中,我们从“”普通豆的基因组序列草案中鉴定出88个完整的WRKY蛋白。预测的基因在所有染色体中均非随机分布。分析了基本信息,氨基酸基序,系统发育树和PvWRKY基因的表达模式,并将蛋白质分为1、2和3组。第2组进一步分为五个亚组:2a,2b,2c,2d,和2e。最后,我们使用qRT-PCR检测到了19个对干旱胁迫有反应的WRKY基因。在干旱胁迫下有11个下调,有8个上调。这项研究全面检查了普通豆(一种典型的豆类食品)中的WRKY蛋白,为WRKY家族的功能表征提供了基础,并为了解该植物的干旱胁迫耐受性机理提供了机会。

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