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Convergence of theory and experiment on the role of preorganization quantum tunneling and enzyme motions into flavoenzyme-catalyzed hydride transfer

机译:关于预组织量子隧穿和酶运动对黄素酶催化的氢化物转移的作用的理论和实验的融合

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摘要

Hydride transfer is one of the most common reactions catalyzed by enzymatic systems and it has become an object of study due to possible significant quantum tunneling effects. In the present work, we provide a combination of theoretical QM/MM simulations and experimental measurements of the rate constants and kinetic isotopic effects (KIEs) for the hydride transfer reaction catalyzed by morphinone reductase, MR. Quantum mechanical tunneling coefficients, computed in the framework of variational transition-state theory, play a significant role in this reaction, reaching values of 23.8 ± 5.5 for the lightest isotopologue; one of the largest values reported for enzymatic systems. This prediction is supported by the agreement between the theoretically predicted rate constants and the corresponding experimental values. Simulations indicate that the role of protein motions can be satisfactorily described as equilibrium fluctuations along the reaction coordinate, in line with a high degree of preorganization displayed by this enzyme.
机译:氢化物转移是酶系统催化的最常见反应之一,由于可能的显着量子隧穿效应,它已成为研究的对象。在目前的工作中,我们提供了理论QM / MM模拟和实验测量值的组合,这些测量值是吗啡酮还原酶MR催化的氢化物转移反应的速率常数和动力学同位素效应(KIEs)。在变分跃迁理论的框架内计算出的量子力学隧穿系数在该反应中起着重要作用,最轻的同位素分子达到23.8±5.5。酶促系统报道的最大值之一。该预测得到理论上预测的速率常数与相应实验值之间一致性的支持。模拟表明,蛋白质运动的作用可以令人满意地描述为沿着反应坐标的平衡波动,这与该酶显示的高度预组织一致。

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