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Identification of the potentiating mutations and synergistic epistasis that enabled the evolution of inter-species cooperation

机译:鉴定使物种间合作得以发展的潜在突变和协同上位

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摘要

Microbes often engage in cooperation through releasing biosynthetic compounds required by other species to grow. Given that production of costly biosynthetic metabolites is generally subjected to multiple layers of negative feedback, single mutations may frequently be insufficient to generate cooperative phenotypes. Synergistic epistatic interactions between multiple coordinated changes may thus often underlie the evolution of cooperation through overproduction of metabolites. To test the importance of synergistic mutations in cooperation we used an engineered bacterial consortium of an Escherichia coli methionine auxotroph and Salmonella enterica. S. enterica relies on carbon by-products from E. coli if lactose is the only carbon source. Directly selecting wild-type S. enterica in an environment that favored cooperation through secretion of methionine only once led to a methionine producer, and this producer both took a long time to emerge and was not very effective at cooperating. On the other hand, when an initial selection for resistance of S. enterica to a toxic methionine analog, ethionine, was used, subsequent selection for cooperation with E. coli was rapid, and the resulting double mutants were much more effective at cooperation. We found that potentiating mutations in metJ increase expression of metA, which encodes the first step of methionine biosynthesis. This increase in expression is required for the previously identified actualizing mutations in metA to generate cooperation. This work highlights that where biosynthesis of metabolites involves multiple layers of regulation, significant secretion of those metabolites may require multiple mutations, thereby constraining the evolution of cooperation.
机译:微生物通常通过释放其他物种生长所需的生物合成化合物来参与合作。鉴于昂贵的生物合成代谢物的生产通常会受到多层负反馈的影响,单个突变可能经常不足以产生协同表型。因此,多个协同变化之间的协同上位相互作用通常可能是由于代谢产物过量生产而导致的合作进化基础。为了测试协同突变在合作中的重要性,我们使用了大肠杆菌蛋氨酸营养缺陷型和肠沙门氏菌的工程菌体。如果乳糖是唯一的碳源,则小肠链球菌依赖于大肠杆菌的碳副产物。在仅通过一次分泌蛋氨酸而有利于合作的环境中直接选择野生型肠炎沙门氏菌会导致一个蛋氨酸生产者,而该生产者都花了很长时间才出现,而且合作起来效率不高。另一方面,当使用针对肠链球菌对毒性蛋氨酸类似物乙硫氨酸的抗性的初始选择时,随后与大肠杆菌合作的选择迅速,并且所得的双突变体在合作方面更加有效。我们发现,metJ中的增强型突变会增加metA的表达,这编码了蛋氨酸生物合成的第一步。这种表达的增加是先前鉴定出的metA突变实现合作所必需的。这项工作强调,在代谢物的生物合成涉及多个调控层的情况下,这些代谢物的大量分泌可能需要多个突变,从而限制了合作的发展。

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