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EMPOWERING CORTICAL THICKNESS MEASURES IN CLINICAL DIAGNOSIS OF ALZHEIMER’S DISEASE WITH SPHERICAL SPARSE CODING

机译:球蛋白稀疏编码在临床诊断阿尔茨海默氏病时应采用硬皮厚度测量

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摘要

Cortical thickness estimation performed in vivo via magnetic resonance imaging (MRI) is an important technique for the diagnosis and understanding of the progression of Alzheimer’s disease (AD). Directly using raw cortical thickness measures as features with Support Vector Machine (SVM) for clinical group classification only yields modest results since brain areas are not equally atrophied during AD progression. Therefore, feature reduction is generally required to retain only the most relevant features for the final classification. In this paper, a spherical sparse coding and dictionary learning method is proposed and it achieves relatively high classification results on publicly available data from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) 2 dataset (N = 201) which contains structural MRI data of four clinical groups: cognitive unimpaired (CU), early mild cognitive impairment (EMCI), later MCI (LMCI) and AD. The proposed framework takes the estimated cortical thickness and the spherical parameterization computed by FreeSurfer as inputs and constructs weighted patches in the spherical parameter domain of the cortical surface. Then sparse coding is applied to the resulting surface patch features, followed by max-pooling to extract the final feature sets. Finally, SVM is employed for binary group classifications. The results show the superiority of the proposed method over other cortical morphometry systems and offer a different way to study the early identification and prevention of AD.
机译:通过磁共振成像(MRI)在体内进行皮层厚度估计是诊断和了解阿尔茨海默氏病(AD)进展的一项重要技术。直接使用原始皮层厚度测量作为支持向量机(SVM)进行临床组分类的功能仅会产生适度的结果,因为在AD进展过程中大脑区域没有得到同等的萎缩。因此,通常需要特征缩减以仅保留最相关的特征以进行最终分类。本文提出了一种球形稀疏编码和字典学习方法,该方法在包含4个临床组的MRI数据的阿尔茨海默氏病神经影像学倡议(ADNI)2数据集(N = 201)的公开数据上获得了较高的分类结果:无认知障碍(CU),早期轻度认知障碍(EMCI),晚期MCI(LMCI)和AD。提出的框架将估计的皮质厚度和FreeSurfer计算的球形参数化作为输入,并在皮质表面的球形参数域中构造加权斑块。然后将稀疏编码应用于所得的表面补丁特征,然后进行最大池化以提取最终特征集。最后,将SVM用于二进制组分类。结果表明,该方法优于其他皮质形态计量学系统,并为研究AD的早期识别和预防提供了不同的方法。

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