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Dual-LED-based multichannel microscopy for whole-slide multiplane multispectral and phase imaging

机译:基于双LED的多通道显微镜可用于全滑动多平面多光谱和相位成像

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摘要

We report the development of a multichannel microscopy for whole-slide multiplane, multispectral, and phase imaging. We use trinocular heads to split the beam path into 6 independent channels and employ a camera array for parallel data acquisition, achieving a maximum data throughput of ~1 gigapixel per second. To perform single-frame rapid autofocusing, we place two near-infrared LEDs at the back focal plane of the condenser lens to illuminate the sample from two different incident angles. A hot mirror is used to direct the near-infrared light to an autofocusing camera. For multiplane whole slide imaging (WSI), we acquire 6 different focal planes of a thick specimen simultaneously. For multispectral WSI, we relay the 6 independent image planes to the same focal position and simultaneously acquire information at 6 spectral bands. For whole-slide phase imaging, we acquire images at 3 focal positions simultaneously and use the transport-of-intensity equation to recover the phase information. We also provide an open-source design to further increase the number of channels from 6 to 15. The reported platform provides a simple solution for multiplexed fluorescence imaging and multimodal WSI. Acquiring an instant focal stack without z-scanning may also enable fast 3D dynamic tracking of various biological samples.
机译:我们报告了全通道多平面,多光谱和相位成像的多通道显微镜的发展。我们使用三目镜头将光束路径分为6个独立通道,并采用摄像头阵列进行并行数据采集,从而实现了每秒约1千兆像素的最大数据吞吐量。为了执行单帧快速自动对焦,我们在聚光镜的后焦平面处放置了两个近红外LED,以从两个不同的入射角度照射样品。热镜用于将近红外光引导至自动对焦的相机。对于多平面全玻片成像(WSI),我们同时获取了一个厚样本的6个不同焦平面。对于多光谱WSI,我们将6个独立的图像平面中继到同一焦点位置,并同时在6个光谱带上获取信息。对于全幻灯片相位成像,我们同时获取3个焦点位置的图像,并使用强度传输方程式恢复相位信息。我们还提供了开放源代码设计,可将通道数从6个进一步增加到15个。报告的平台为多重荧光成像和多模式WSI提供了简单的解决方案。在不进行z扫描的情况下获取即时对焦堆栈还可以实现各种生物样品的快速3D动态跟踪。

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