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TNF Receptor Type II as an Emerging Drug Target for the Treatment of Cancer Autoimmune Diseases and Graft-Versus-Host Disease: Current Perspectives and In Silico Search for Small Molecule Binders

机译:II型TNF受体作为治疗癌症自身免疫性疾病和移植物抗宿主病的新兴药物靶标:当前观点和在计算机模拟中寻找小分子粘合剂

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摘要

There is now compelling evidence that TNF receptor type II (TNFR2) is predominantly expressed on CD4+Foxp3+ regulatory T cells (Tregs) and myeloid-derived suppressor cells (MDSCs), and plays a major role in the expansion and function of Tregs and MDSCs. Consequently, targeting of TNFR2 by either antagonists or agonists may represent a novel strategy in the treatment of cancer and autoimmune diseases, by downregulating or upregulating suppressor cell activity. The advance in the understanding of complex structure of TNFR2 and its binding with TNF at molecular levels offers opportunity for structure-guided drug discovery. This article reviews the current evidences regarding the decisive role of TNFR2 in immunosuppressive function of Tregs and MDSCs, and the current effort to develop novel TNFR2-targeting therapeutic agents in the treatment of cancer, autoimmune diseases, and graft-versus-host disease. To shed light on the potential TNFR2-targeting small molecules, we for the first time performed virtual screening of 400,000 natural compounds against the two TNF-binding sites, regions 3 and 4, of TNFR2. Our result showed that the top hits at region 4 had slightly higher docking energies than those at region 3. Nevertheless, free energy calculation from the TNF–TNFR2 molecular dynamics simulation revealed that the binding strength of TNF in region 3 is only one-tenth of that in region 4. This suggests that region 3 is a potentially more viable binding site to be targeted by small molecules than region 4. Therefore, the effectiveness in targeting region 3 of TNFR2 deserves further investigation.
机译:现在有令人信服的证据表明,II型TNF受体(TNFR2)主要在CD4 + Foxp3 + 调节性T细胞(Tregs)和髓样来源的抑制细胞(MDSCs)上表达,并且在Treg和MDSC的扩展和功能中起着重要作用。因此,通过下调或上调抑制细胞的活性,通过拮抗剂或激动剂靶向TNFR2可能代表了一种治疗癌症和自身免疫性疾病的新策略。对TNFR2复杂结构及其在分子水平上与TNF的结合的理解的进步为结构导向的药物发现提供了机会。本文回顾了有关TNFR2在Tregs和MDSCs的免疫抑制功能中起决定性作用的最新证据,以及有关开发靶向TNFR2的新型治疗剂用于治疗癌症,自身免疫性疾病和移植物抗宿主病的当前证据。为了阐明潜在的靶向TNFR2的小分子,我们首次针对TNFR2的两个TNF结合位点3和4进行了40万种天然化合物的虚拟筛选。我们的结果表明,区域4的顶部命中点具有比区域3更高的对接能量。尽管如此,根据TNF-TNFR2分子动力学模拟的自由能计算,发现区域3中TNF的结合强度仅为分子的十分之一。这表明区域3是比区域4更容易被小分子靶向的结合位点。因此,靶向TNFR2区域3的有效性值得进一步研究。

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