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Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilsons storm petrel Oceanites oceanicus in Antarctica

机译:跨物种筛选微卫星标记物以分别识别南极雪海燕Pagodroma nivea和威尔逊风暴海燕Oceanites oceanicus

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摘要

Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabird species nesting on the Antarctic continents, and long-term studies are required to gather data on their population demography, genetics and other ecological parameters. Under the ‘Biology and Environmental Sciences’ component of the Indian Antarctic programme, long-term monitoring of Antarctic biodiversity is being conducted. In this paper, we describe results of cross-species screening of a panel of 12 and 10 microsatellite markers in two relatively little studied seabird species in Antarctica, the snow petrel Pagodroma nivea and the Wilson's storm petrel Oceanites oceanicus, respectively. These loci showed high amplification success and moderate levels of polymorphism in snow petrel (mean no. of alleles 7.08 ± 3.01 and mean observed heterozygosity 0.35 ± 0.23), but low polymorphism in Wilson's storm petrel (mean no. of alleles 3.9 ± 1.3 and mean observed heterozygosity 0.28 ± 0.18). The results demonstrate that these panels can unambiguously identify individuals of both species (cumulative PIDsibs for snow petrel is 3.7 × 10−03 and Wilson's storm petrel is 1.9 × 10−02) from field-collected samples. This work forms a baseline for undertaking long-term genetic research of these Antarctic seabird species and provides critical insights into their population genetics.
机译:海鸟是海洋生态系统健康的重要指标。 Procellariiformes阶内的物种是最丰富的海鸟物种,分布在热带和冷温带地区,包括南极洲。在南极大陆上嵌套的中上层海鸟物种的基本生物学信息很少,需要长期研究以收集有关其种群人口统计学,遗传学和其他生态参数的数据。在印度南极计划的“生物与环境科学”部分下,正在进行对南极生物多样性的长期监测。在本文中,我们描述了在南极洲的两个相对较少研究的海鸟物种(分别为雪海燕Pagodroma nivea和威尔逊风暴海燕Oceanites oceanicus)中,对12个和10个微卫星标记进行的跨物种筛选的结果。这些基因座在雪海燕中显示出较高的扩增成功率和中等水平的多态性(平均等位基因数目为7.08±3.01,平均观察到的杂合度为0.35±0.23),而在威尔逊风暴海燕中,其低多态性(平均等位基因数目为3.9±1.3和平均数)观察到的杂合度0.28±0.18)。结果表明,这些面板可以清楚地识别两个物种的个体(积雪海燕的累积PIDsibs为3.7×10 -03 ,而威尔逊的风暴海燕为1.9×10 −02 )从现场收集的样本中。这项工作为进行这些南极海鸟物种的长期遗传研究奠定了基础,并为他们的种群遗传学提供了重要的见识。

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