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Genetic Susceptibility to Leprosy—From Classic Immune-Related Candidate Genes to Hypothesis-Free Whole Genome Approaches

机译:麻风病的遗传易感性-从经典的免疫相关候选基因到无假说的全基因组方法

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摘要

Genetics plays a crucial role in controlling susceptibility to infectious diseases by modulating the interplay between humans and pathogens. This is particularly evident in leprosy, since the etiological agent, Mycobacterium leprae, displays semiclonal characteristics not compatible with the wide spectrum of disease phenotypes. Over the past decades, genetic studies have unraveled several gene variants as risk factors for leprosy per se, disease clinical forms and the occurrence of leprosy reactions. As expected, several of these genes are immune-related; yet, hypothesis-free approaches have led to genes not classically linked to immune response. The PARK2, originally described as a Parkinson’s disease gene, illustrates the case: Parkin—the protein coded by PARK2—was defined as an important player regulating innate and adaptive immune responses only years after its description as a leprosy susceptibility gene. Interestingly, even with the use of powerful hypothesis-free study designs such as genome-wide association studies, most of the major gene effect controlling leprosy susceptibility remains elusive. One hypothesis to explain this “hidden heritability” is that rare variants not captured by classic association studies are of critical importance. To address this question, massively parallel sequencing of large segments of the human genome—even whole exomes/genomes—is an alternative to properly identify rare, disease-causing mutations. These mutations may then be investigated through sophisticated approaches such as cell reprogramming and genome editing applied to create in vitro models for functional leprosy studies.
机译:遗传学通过调节人与病原体之间的相互作用,在控制传染病的易感性中起着至关重要的作用。这在麻风病中尤其明显,因为病原体麻风分枝杆菌显示出与多种疾病表型不相容的半克隆特征。在过去的几十年中,遗传学研究揭示了几种基因变异作为麻风病本身,疾病临床形式和麻风反应发生的危险因素。正如预期的那样,其中一些基因与免疫有关。然而,无假设的方法已经导致基因与免疫反应没有经典的联系。最初被描述为帕金森氏病基因的PARK2阐明了这种情况:Parkin(由PARK2编码的蛋白质)在被描述为麻风易感基因后数年,就被定义为调节先天和适应性免疫反应的重要参与者。有趣的是,即使使用了无假设的强大研究设计,例如全基因组关联研究,控制麻风易感性的大多数主要基因效应仍然难以捉摸。一种解释这种“隐性遗传力”的假说是,经典关联研究未捕获的稀有变异至关重要。为了解决这个问题,对人类基因组大部分甚至整个外显子组/基因组进行大规模并行测序是正确识别罕见的致病突变的一种选择。然后可以通过复杂的方法研究这些突变,例如细胞重编程和基因组编辑,以创建用于功能性麻风研究的体外模型。

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