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UDP-Sugar Producing Pyrophosphorylases: Distinct and Essential Enzymes With Overlapping Substrate Specificities Providing de novo Precursors for Glycosylation Reactions

机译:UDP糖生产焦磷酸酶:具有重叠底物特异性的独特酶和必需酶为糖基化反应提供从头开始

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摘要

Nucleotide sugars are the key precursors for all glycosylation reactions and are required both for oligo- and polysaccharides synthesis and protein and lipid glycosylation. Among all nucleotide sugars, UDP-sugars are the most important precursors for biomass production in nature (e.g., synthesis of cellulose, hemicellulose, and pectins for cell wall production). Several recent studies have already suggested a potential role for UDP-Glc in plant growth and development, and UDP-Glc has also been suggested as a signaling molecule, in addition to its precursor function. In this review, we will cover primary mechanisms of formation of UDP-sugars, by focusing on UDP-sugar metabolizing pyrophosphorylases. The pyrophosphorylases can be divided into three families: UDP-Glc pyrophosphorylase (UGPase), UDP-sugar pyrophosphorylase (USPase), and UDP-N-acetyl glucosamine pyrophosphorylase (UAGPase), which can be distinguished both by their amino acid sequences and by differences in substrate specificity. Substrate specificities of these enzymes are discussed, along with structure-function relationships, based on their crystal structures and homology modeling. Earlier studies with transgenic plants have revealed that each of the pyrophosphorylases is essential for plant survival, and their loss or a decrease in activity results in reproductive impairment. This constitutes a problem when studying exact in vivo roles of the enzymes using classical reverse genetics approaches. Thus, strategies involving the use of specific inhibitors (reverse chemical genetics) are also discussed. Further characterization of the properties/roles of pyrophosphorylases should address fundamental questions dealing with mechanisms and control of carbohydrate synthesis and may allow to identify targets for manipulation of biomass production in plants.
机译:核苷酸糖是所有糖基化反应的关键前体,是寡糖和多糖合成以及蛋白质和脂质糖基化的必需物质。在所有核苷酸糖中,UDP-糖是自然界中生物质生产最重要的前体(例如,用于细胞壁生产的纤维素,半纤维素和果胶的合成)。最近的一些研究已经表明UDP-Glc在植物生长和发育中的潜在作用,并且除其前体功能外,还建议使用UDP-Glc作为信号分子。在这篇综述中,我们将着重于UDP糖代谢焦磷酸酶,从而探讨UDP糖形成的主要机理。焦磷酸酶可分为三个家族:UDP-Glc焦磷酸磷酸化酶(UGPase),UDP糖焦磷酸磷酸化酶(USPase)和UDP-N-乙酰氨基葡糖焦磷酸磷酸化酶(UAGPase),可以通过其氨基酸序列和差异来区分在底物特异性上。基于这些酶的晶体结构和同源性模型,讨论了这些酶的底物特异性以及结构-功能关系。早期对转基因植物的研究表明,每种焦磷酸酶对于植物存活都是必不可少的,它们的丧失或活性降低会导致生殖功能受损。当使用经典逆向遗传学方法研究酶的确切体内作用时,这构成了一个问题。因此,还讨论了涉及使用特定抑制剂(逆向化学遗传学)的策略。焦磷酸酯的性质/作用的进一步表征应解决与碳水化合物合成的机制和控制有关的基本问题,并且可以允许确定用于操纵植物中生物量生产的靶标。

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