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Evolutionary Story of a Satellite DNA from Phodopus sungorus (Rodentia Cricetidae)

机译:夜蛾(Phodopus sungorus)(RodentiaCricetidae)的卫星DNA的进化故事。

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摘要

With the goal to contribute for the understanding of satellite DNA evolution and its genomic involvement, in this work it was isolated and characterized the first satellite DNA (PSUcentSat) from Phodopus sungorus (Cricetidae). Physical mapping of this sequence in P. sungorus showed large PSUcentSat arrays located at the heterochromatic (peri)centromeric region of five autosomal pairs and Y-chromosome. The presence of orthologous PSUcentSat sequences in the genomes of other Cricetidae and Muridae rodents was also verified, presenting however, an interspersed chromosomal distribution. This distribution pattern suggests a PSUcentSat-scattered location in an ancestor of Muridae/Cricetidae families, that assumed afterwards, in the descendant genome of P. sungorus a restricted localization to few chromosomes in the (peri)centromeric region. We believe that after the divergence of the studied species, PSUcentSat was most probably highly amplified in the (peri)centromeric region of some chromosome pairs of this hamster by recombinational mechanisms. The bouquet chromosome configuration (prophase I) possibly displays an important role in this selective amplification, providing physical proximity of centromeric regions between chromosomes with similar size and/or morphology. This seems particularly evident for the acrocentric chromosomes of P. sungorus (including the Y-chromosome), all presenting large PSUcentSat arrays at the (peri)centromeric region. The conservation of this sequence in the studied genomes and its (peri)centromeric amplification in P. sungorus strongly suggests functional significance, possibly displaying this satellite family different functions in the different genomes. The verification of PSUcentSat transcriptional activity in normal proliferative cells suggests that its transcription is not stage-limited, as described for some other satellites.
机译:为了有助于对卫星DNA进化及其基因组参与的理解,在这项工作中,对它进行了分离并鉴定了来自日本黑夜蛾(Podopus sungorus(Cricetidae))的第一个卫星DNA(PSUcentSat)。该序列在P. sungorus中的物理作图显示了位于五个常染色体对和Y染色体的异色(周)着丝粒区域的大型PSUcentSat阵列。还验证了其他Cricetidae和Muridae啮齿动物的基因组中直系同源的PSUcentSat序列的存在,但是存在散布的染色体分布。这种分布模式表明,在鼠科/ ric科的祖先中存在一个PSUcentSat散布的位置,此后推测,在太阳假单胞菌的后代基因组中,该定位局限于(周围)着丝粒区域中的少数染色体。我们认为,经过研究的物种分化后,PSUcentSat很可能通过重组机制在该仓鼠的某些染色体对的(周)着丝粒区域高度扩增。在此选择性扩增中,花束染色体构型(前期I)可能显示出重要作用,提供了大小和/或形态相似的染色体之间着丝粒区域的物理接近。这似乎对于太阳假单胞菌的顶极染色体(包括Y染色体)尤为明显,它们都在(周边)着丝粒区域呈现大的PSUcentSat阵列。该序列在所研究的基因组中的保守性及其在日光疟原虫中的(周)着丝粒扩增强烈表明其功能重要性,可能显示该卫星家族在不同基因组中具有不同功能。正常增殖细胞中PSUcentSat转录活性的验证表明,其转录不受阶段限制,如其他一些卫星所述。

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