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Self-sorting heterodimeric coiled coil peptides with defined and tuneable self-assembly properties

机译:具有确定的和可调节的自组装特性的自选异二聚体卷曲螺旋肽

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摘要

Coiled coils with defined assembly properties and dissociation constants are highly attractive components in synthetic biology and for fabrication of peptide-based hybrid nanomaterials and nanostructures. Complex assemblies based on multiple different peptides typically require orthogonal peptides obtained by negative design. Negative design does not necessarily exclude formation of undesired species and may eventually compromise the stability of the desired coiled coils. This work describe a set of four promiscuous 28-residue de novo designed peptides that heterodimerize and fold into parallel coiled coils. The peptides are non-orthogonal and can form four different heterodimers albeit with large differences in affinities. The peptides display dissociation constants for dimerization spanning from the micromolar to the picomolar range. The significant differences in affinities for dimerization make the peptides prone to thermodynamic social self-sorting as shown by thermal unfolding and fluorescence experiments, and confirmed by simulations. The peptides self-sort with high fidelity to form the two coiled coils with the highest and lowest affinities for heterodimerization. The possibility to exploit self-sorting of mutually complementary peptides could hence be a viable approach to guide the assembly of higher order architectures and a powerful strategy for fabrication of dynamic and tuneable nanostructured materials.
机译:具有确定的组装特性和解离常数的螺旋线圈在合成生物学中和用于制造基于肽的杂化纳米材料和纳米结构中是非常有吸引力的组件。基于多种不同肽的复杂装配体通常需要通过阴性设计获得的正交肽。负设计不一定排除不希望有的物质的形成,并且最终可能会损害所需线圈的稳定性。这项工作描述了一组四个混杂的28个残基从头设计的肽,它们异二聚并折叠成平行的卷曲螺旋。所述肽是非正交的,并且可以形成四个不同的异二聚体,尽管亲和力差异很大。肽显示出从微摩尔到皮摩尔范围的二聚化解离常数。如热展开和荧光实验所示,二聚体亲和力的显着差异使肽易于发生热力学社会自选,并通过模拟证实。所述肽以高保真度自分类以形成两个具有最高和最低亲和力的异源二聚体的卷曲螺旋。因此,利用相互互补的肽段进行自我分选的可能性可能是指导高阶结构组装的可行方法,并且是制造动态可调谐纳米结构材料的有力策略。

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