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Automated detection and classification of early AMD biomarkers using deep learning

机译:使用深度学习对早期AMD生物标志物进行自动检测和分类

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摘要

Age-related macular degeneration (AMD) affects millions of people and is a leading cause of blindness throughout the world. Ideally, affected individuals would be identified at an early stage before late sequelae such as outer retinal atrophy or exudative neovascular membranes develop, which could produce irreversible visual loss. Early identification could allow patients to be staged and appropriate monitoring intervals to be established. Accurate staging of earlier AMD stages could also facilitate the development of new preventative therapeutics. However, accurate and precise staging of AMD, particularly using newer optical coherence tomography (OCT)-based biomarkers may be time-intensive and requires expert training which may not feasible in many circumstances, particularly in screening settings. In this work we develop deep learning method for automated detection and classification of early AMD OCT biomarker. Deep convolution neural networks (CNN) were explicitly trained for performing automated detection and classification of hyperreflective foci, hyporeflective foci within the drusen, and subretinal drusenoid deposits from OCT B-scans. Numerous experiments were conducted to evaluate the performance of several state-of-the-art CNNs and different transfer learning protocols on an image dataset containing approximately 20000 OCT B-scans from 153 patients. An overall accuracy of 87% for identifying the presence of early AMD biomarkers was achieved.
机译:与年龄有关的黄斑变性(AMD)影响数百万人,是全世界失明的主要原因。理想情况下,应在后期后遗症如视网膜外层萎缩或渗出性新血管膜形成之前及早识别出受影响的个体,这可能会导致不可逆的视力丧失。早期识别可以使患者分期并建立适当的监测间隔。 AMD早期阶段的准确分期还可以促进新的预防性疗法的开发。但是,准确,准确地分期AMD,尤其是使用更新的基于光学相干断层扫描(OCT)的生物标记物可能会耗费大量时间,并且需要专家培训,这在许多情况下尤其是在筛查环境中可能不可行。在这项工作中,我们开发了深度学习方法,用于早期AMD OCT生物标记物的自动检测和分类。深度卷积神经网络(CNN)经过明确训练,可以执行自动检测和分类,以检测OCT B扫描的玻璃膜疣,玻璃膜疣内的玻璃膜反射瘤和视网膜下玻璃膜样沉积物。在包含来自153位患者的约20000次OCT B扫描的图像数据集上,进行了许多实验以评估几种最新的CNN和不同的转移学习协议的性能。鉴定早期AMD生物标志物的总准确度达到87%。

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