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Interactive contribution of serine/threonine kinase 39 gene multiple polymorphisms to hypertension among northeastern Han Chinese

机译:东北汉族人群中丝氨酸/苏氨酸激酶39基因多态性对高血压的交互作用

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摘要

Serine/threonine kinase 39 (STK39) gene has been reported to be a hypertension-susceptibility gene by a recent genome-wide association study in Western populations. To validate this finding in Chinese, we focused on five well-characterized common polymorphisms in STK39 gene to examine their potential association with hypertension in a large northeastern Han population. This is a hospital-based case-control study involving 1009 hypertensive patients and 756 normotensive controls. Data were analyzed by the Haplo.Stats and multifactor dimensionality reduction (MDR) softwares. The genotype and allele distributions of rs6749447, rs3754777 and rs6433027 differed significantly between patients and controls (P < 0.001) even after the Bonferroni correction. The majority of derived haplotypes also showed remarkable differences between the two groups (P ≤ 0.001). As indicated by MDR analysis, a three-locus model including rs6749447, rs35929607 and rs3754777 was selected as the overall best with a larger testing accuracy of 0.7309 and a maximum cross-validation consistency of 10 (P < 0.001). The utility of this model was reinforced by a Logistic regression analysis. Taken together, our findings suggest the potential interactive role of STK39 gene multiple polymorphisms in the development of hypertension among northeastern Han Chinese.
机译:最近在西方人群中进行的全基因组关联研究表明,丝氨酸/苏氨酸激酶39(STK39)基因是高血压易感基因。为了在中文中验证这一发现,我们集中研究了STK39基因中五个特征明确的常见多态性,以检查它们与东北大汉族人群高血压的潜在关联。这是一项基于医院的病例对照研究,涉及1009名高血压患者和756名血压正常对照。通过Haplo.Stats和多因素降维(MDR)软件分析数据。即使在Bonferroni校正后,患者和对照组之间rs6749447,rs3754777和rs6433027的基因型和等位基因分布也存在显着差异(P <0.001)。多数衍生的单倍型在两组之间也显示出显着差异(P≤0.001)。如MDR分析所示,选择了包括rs6749447,rs35929607和rs3754777的三基因座模型作为总体最佳选择,其测试精度为0.7309,最大交叉验证一致性为10(P <0.001)。该模型的实用性通过Logistic回归分析得到了增强。综上所述,我们的发现表明,东北汉族人群中STK39基因多态性在高血压的发生中可能具有潜在的相互作用。

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