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Selection of suitable reference genes for qRT-PCR normalization during leaf development and hormonal stimuli in tea plant (Camellia sinensis)

机译:茶树叶片发育和激素刺激过程中qRT-PCR标准化的合适参考基因的选择

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摘要

Tea plant (Camellia sinensis) leaf is an important non-alcoholic beverage resource. The application of quantitative real time polymerase chain reaction (qRT-PCR) has a profound significance for the gene expression studies of tea plant, especially when applied to tea leaf development and metabolism. In this study, nine candidate reference genes (i.e., CsACT7, CsEF-1α, CseIF-4α, CsGAPDH, CsPP2A, CsSAND, CsTBP, CsTIP41, and CsTUB) of C. sinensis were cloned. The quantitative expression data of these genes were investigated in five tea leaf developmental stages (i.e., 1st, 2nd, 3rd, 4th, and older leaves) and normal growth tea leaves subjected to five hormonal stimuli (i.e., ABA, GA, IAA, MeJA, and SA), and gene expression stability was calculated using three common statistical algorithms, namely, geNorm, NormFinder, and Bestkeeper. Results indicated that CsTBP and CsTIP41 were the most stable genes in tea leaf development and CsTBP was the best gene under hormonal stimuli; by contrast, CsGAPDH and CsTUB genes showed the least stability. The gene expression profile of CsNAM gene was analyzed to confirm the validity of the reference genes in this study. Our data provide basis for the selection of reference genes for future biological research in the leaf development and hormonal stimuli of C. sinensis.
机译:茶树(茶树)的叶子是重要的非酒精饮料资源。定量实时聚合酶链反应(qRT-PCR)的应用对茶树的基因表达研究具有深远的意义,特别是应用于茶叶的发育和代谢。在这项研究中,克隆了中华假丝酵母的9个候选参考基因(即CsACT7,CsEF-1α,CseIF-4α,CsGAPDH,CsPP2A,CsSAND,CsTBP,CsTIP41和CsTUB)。在五个茶叶发育阶段(即第1、2、3、4和更老的叶子)和正常生长的茶叶中,经过五个激素刺激(即ABA,GA,IAA,MeJA)对这些基因的定量表达数据进行了研究。和SA),并使用三种常见的统计算法(geNorm,NormFinder和Bestkeeper)计算基因表达的稳定性。结果表明,在激素刺激下,CsTBP和CsTIP41是最稳定的基因,CsTBP是最佳的基因。相比之下,CsGAPDH和CsTUB基因显示出最低的稳定性。分析了CsNAM基因的基因表达谱,以确认本研究中参考基因的有效性。我们的数据为选择参考基因提供了基础,这些参考基因用于将来对 C的叶片发育和激素刺激的生物学研究。中华

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