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Bioprospection of Basidiomycetes and molecular phylogenetic analysis using internal transcribed spacer (ITS) and 5.8S rRNA gene sequence

机译:使用内部转录间隔区(ITS)和5.8S rRNA基因序列进行担子菌的生物勘探和分子系统发育分析

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摘要

Macrofungi belonging to the phylum Basidiomycota are mostly used as medicinal mushrooms in many countries. In the present study, hundred basidiocarp of macrofungi were collected from Tamilnadu during rainy season. The basidiocarp was found in association with root/trunk of living trees, wood log and decayed matter. Among the hundred basidiocarp, 49 were grown into axenic cultures. Notable variations in the macroscopic characteristics of the basidiome and culture morphology were observed. To study the genetic diversity, the molecular taxonomy of the isolates was carried out using internal transcribed spacer (ITS) and 5.8S rRNA gene sequence marker. Thirty-two strains belonging to the order Polyporales, Hymenochataeles and Russuales under the division Basidiomycota were classified based on phylogeny analysis. This study provides first evidence for the occurrence of species Fulvifomes fastuosus (LDCMY39 and LDCMY43) and Ganoderma wiiroense (LDCMY02, LDCMY08, LDCMY11, LDCMY17 and LDCMY19) from southern India. Molecular evidence for the existence of Phellinus badius was given for the first time as well. These data enhance our understanding on the diversity of macrofungi in India, which could be further exploited for biomedical applications.
机译:属于Basidiomycota门的大型真菌在许多国家中大多用作药用蘑菇。在本研究中,在雨季期间,从泰米尔纳德邦收集了100株大型真菌的沉香果。紫苏果皮与活树的根/树干,原木和腐烂物质有关。在一百种紫苏果中,有49种被培植为疏生菌。观察到了碱基组的宏观特征和培养物形态的显着变化。为了研究遗传多样性,使用内部转录间隔区(ITS)和5.8S rRNA基因序列标记对分离株进行了分子分类。基于系统发育分析,对属于担子菌科的多孢菌,膜翅目和芸苔科的32个菌株进行了分类。这项研究提供了印度南部的物种Fulvifomes fastuosus(LDCMY39和LDCMY43)和wienoense灵芝(LDCMY02,LDCMY08,LDCMY11,LDCMY17和LDCMY19)的初步证据。首次也给出了桑黄(Phellinus badius)存在的分子证据。这些数据加深了我们对印度大型真菌多样性的了解,可以进一步将其用于生物医学应用。

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