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Trypanosoma cruzi Genotypes of Insect Vectors and Patients with Chagas of Chile Studied by Means of Cytochrome b Gene Sequencing Minicircle Hybridization and Nuclear Gene Polymorphisms

机译:利用细胞色素b基因测序微圆杂交和核基因多态性研究智利媒介昆虫和锥虫的锥虫锥虫基因型

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摘要

Fifty-six Trypanosoma cruzi stocks from Chile and neighboring countries and different hosts, humans, and Triatoma infestans and Mepraia sp., vectors of domiciliary and natural environments were characterized by using three molecular markers. These were cytochrome b (Cyt b) gene sequencing, minicircle DNA blotting, and hybridization with five genotype-specific DNA probes and nuclear analysis of 1f8 and gp72 by polymerase chain reaction–restriction fragment length polymorphism. The results with all three molecular markers are concordant, with minor limitations, grouping T. cruzi stocks into four discrete typing units (DTUs) (TcI, TcII, TcV, and TcVI). TcI and TcII stocks were heterogeneous. TcI and TcII stocks were clustered in two main subgroups determined by Cyt b gene sequencing and minicircle hybridization. However, TcV and TcVI stocks were homogeneous and not differentiated by Cyt b gene sequencing or minicircle DNA hybridization. The discriminatory power and limitations of the molecular markers are discussed, as well as the distribution of the four DTUs in the domiciliary and sylvatic transmission cycles of Chile and the limitations of each marker for molecular epidemiological studies performed with T. cruzi stocks rather than the analysis of direct T. cruzi samples from natural hosts.
机译:来自智利和邻国的56种克氏锥虫种群以及不同的寄主,人类以及Triatoma infestans和Mepraia sp。,使用三个分子标记对住所和自然环境的载体进行了表征。这些是细胞色素b(Cyt b)基因测序,小环DNA印迹,与五种基因型特异性DNA探针杂交以及通过聚合酶链反应-限制性片段长度多态性对1f8和gp72的核分析。所有这三种分子标记的结果均一致,但有较小的局限性,将克鲁氏锥虫种群分为四个离散的打字单位(DTU)(TcI,TcII,TcV和TcVI)。 TcI和TcII股票是异类的。通过Cyt b基因测序和微圆杂交确定的TcI和TcII储备库分为两个主要亚组。但是,TcV和TcVI储备是同质的,不能通过Cyt b基因测序或微圆DNA杂交来区分。讨论了分子标记物的区分力和局限性,以及智利的定居和sylvatic传播周期中四个DTU的分布,以及每个标记物在克氏锥虫种群而非分析中进行分子流行病学研究的局限性来自自然宿主的直接克氏锥虫样品。

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