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An improved Bayesian tensor regularization and sampling algorithm to track neuronal fiber pathways in the language circuit

机译:改进的贝叶斯张量正则化和采样算法以跟踪语言电路中的神经元纤维通路

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摘要

>Purpose: The purpose of this work is to design a neuronal fiber tracking algorithm, which will be more suitable for reconstruction of fibers associated with functionally important regions in the human brain. The functional activations in the brain normally occur in the gray matter regions. Hence the fibers bordering these regions are weakly myelinated, resulting in poor performance of conventional tractography methods to trace the fiber links between them. A lower fractional anisotropy in this region makes it even difficult to track the fibers in the presence of noise. In this work, the authors focused on a stochastic approach to reconstruct these fiber pathways based on a Bayesian regularization framework.>Methods: To estimate the true fiber direction (propagation vector), the a priori and conditional probability density functions are calculated in advance and are modeled as multivariate normal. The variance of the estimated tensor element vector is associated with the uncertainty due to noise and partial volume averaging (PVA). An adaptive and multiple sampling of the estimated tensor element vector, which is a function of the pre-estimated variance, overcomes the effect of noise and PVA in this work.>Results: The algorithm has been rigorously tested using a variety of synthetic data sets. The quantitative comparison of the results to standard algorithms motivated the authors to implement it for in vivo DTI data analysis. The algorithm has been implemented to delineate fibers in two major language pathways (Broca’s to SMA and Broca’s to Wernicke’s) across 12 healthy subjects. Though the mean of standard deviation was marginally bigger than conventional (Euler’s) approach [], the number of extracted fibers in this approach was significantly higher. The authors also compared the performance of the proposed method to Lu’s method [] and Friman’s stochastic approach []. Overall performance of the approach is found to be superior to above two methods, particularly when the signal-to-noise ratio was low.>Conclusions: The authors observed that an adaptive sampling of the tensor element vectors, estimated as a function of the variance in a Bayesian framework, can effectively delineate neuronal fibers to analyze the structure-function relationship in human brain. The simulated and in vivo results are in good agreement with the theoretical aspects of the algorithm.
机译:>目的:这项工作的目的是设计一种神经元纤维跟踪算法,该算法将更适合于重建与人脑中功能重要区域相关的纤维。大脑中的功能激活通常发生在灰质区域。因此,与这些区域接壤的纤维几乎没有髓鞘,导致传统的放射线照相法在追踪它们之间的纤维连接方面表现不佳。在该区域中较低的分数各向异性使得在存在噪声的情况下甚至难以追踪光纤。在这项工作中,作者集中于基于贝叶斯正则化框架的随机方法来重建这些纤维路径。>方法:要估计真实的纤维方向(传播向量),先验和条件概率密度函数是预先计算的,并建模为多元正态。估计张量元素向量的方差与由于噪声和部分体积平均(PVA)引起的不确定性相关。估计张量元素向量的自适应和多次采样是预先估计的方差的函数,在这项工作中克服了噪声和PVA的影响。>结果:该算法已使用进行了严格的测试各种综合数据集。结果与标准算法的定量比较促使作者将其实现为体内DTI数据分析。该算法已经实现,可以在12个健康受试者中以两种主要的语言途径(从Brooca到SMA,从Broca到Wernicke)描绘纤维。尽管标准偏差的平均值比常规方法[Euler's]略大,但这种方法中提取的纤维数量明显更高。作者还比较了所提出的方法与Lu的方法[]和Friman的随机方法[]的性能。发现该方法的总体性能优于上述两种方法,尤其是在信噪比较低时。>结论:作者观察到,张量元素矢量的自适应采样估计作为贝叶斯框架中方差的函数,可以有效地描绘神经元纤维,以分析人脑的结构与功能的关系。模拟和体内结果与算法的理论方面非常吻合。

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