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Comparative proteomic analysis of serum diagnosis patterns of sputum smear-positive pulmonary tuberculosis based on magnetic bead separation and mass spectrometry analysis

机译:基于磁珠分离和质谱分析的痰涂片阳性肺结核血清诊断模式的比较蛋白质组学分析

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摘要

A major challenge in pulmonary tuberculosis (TB) control is early and accurate diagnosis of sputum smear negative pulmonary TB (SSN-PTB). The patients with SSN-PTB have to wait for a longer period of time before receiving proper treatment than sputum smear positive pulmonary TB (SSP-PTB) patients due to delay in diagnosis. The purpose of this study is to discover potential serum protein biomarkers for SSN-PTB. Surface-enhanced laser desorption/ionization-time of flight mass spectrometry (SELDI-TOF MS) combined with weak cation exchange (WCX) magnetic beads was used to screen serum samples from SSN-PTB patients (N = 66), SSP-PTB patients (N = 49), and healthy volunteers (N = 80). The serum protein profiles were analyzed with Biomarker Wizard system. A classification model was established using Biomarker Pattern Software (BPS). Fifty-eight protein peaks were identified to exhibit significant differences between SSN-PTB, SSP-PTB and healthy control groups (P < 0.05), among which 6 peaks were found to be down-regulated, while 10 peaks were up-regulated gradually in the healthy control, SSN-PTB, and SSP-PTB groups. Twenty-three discriminating m/z peaks were detected between SSN-PTB patients and healthy controls (P < 0.01, Fold ≥ 1.5). The classification tree combined with three protein peaks (2747.0, 4480.0, and 9410.1 Da) could distinguish SSN-PTB patients from healthy controls with a sensitivity of 83.33% and a specificity of 82.50%. Early diagnosis of SSN-PTB disease is critical in order to reduce morbidity and mortality associated with TB. The study will help to clarify the role of differential proteins in the pathogenesis of TB.
机译:控制肺结核(TB)的主要挑战是对痰涂片阴性肺结核(SSN-PTB)进行早期准确诊断。 SSN-PTB患者与痰涂片阳性的肺结核患者(SSP-PTB)相比,由于诊断延迟,必须等待更长的时间才能接受适当的治疗。这项研究的目的是发现潜在的SSN-PTB血清蛋白生物标志物。表面增强激光解吸/电离飞行时间质谱(SELDI-TOF MS)结合弱阳离子交换(WCX)磁珠用于筛选SSN-PTB患者(N = 66),SSP-PTB患者的血清样品(N = 49)和健康志愿者(N = 80)。用Biomarker Wizard系统分析血清蛋白谱。使用生物标记模式软件(BPS)建立了分类模型。在SSN-PTB,SSP-PTB和健康对照组之间发现58个蛋白峰表现出显着差异(P <0.05),其中6个峰被下调,而10个峰在上清中逐渐上调。健康对照组,SSN-PTB和SSP-PTB组。在SSN-PTB患者和健康对照之间检测到23个可区分的m / z峰(P <0.01,Fold≥1.5)。分类树结合三个蛋白质峰(2747.0、4480.0和9410.1 Da)可以将SSN-PTB患者与健康对照区分开,敏感性为83.33%,特异性为82.50%。 SSN-PTB疾病的早期诊断对于降低结核病的发病率和死亡率至关重要。该研究将有助于阐明差异蛋白在结核病发病机理中的作用。

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