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Intracranial Aneurysms in Finnish Families: Confirmation of Linkage and Refinement of the Interval to Chromosome 19q13.3

机译:芬兰家庭的颅内动脉瘤:连锁和染色体19q13.3间隔的完善的确认。

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摘要

We recently reported a two-stage genomewide screen of 48 sib pairs affected with intracranial aneurysms (IAs) that revealed suggestive linkage to chromosome 19q13, with a LOD score of 2.58. The region supporting linkage spanned ∼22 cM. Here, we report a follow-up study of the locus at 19q13, with a sample size expanded to 139 affected sib pairs, along with 83 other affected relative pairs (222 affected relative pairs in total). Suggestive linkage was observed in both independent sample sets, and linkage was significant in the combined set at 70 cM (LOD score 3.50; P=.00006) and at 80 cM (LOD score 3.93; P=.00002). Linkage was highly significant at 70 cM (LOD score 5.70; P=.000001) and at 80 cM (LOD score 3.99; P=.00005) when a covariate measuring the number of affected individuals in the nuclear family was included. To evaluate further the contribution to the linkage signal from families with more than two affected relatives, we performed model-based linkage analysis with a recessive model and a range of penetrances, and we obtained maximum linkage at 70 cM (LOD score 3.16; P=.00007) with a penetrance of 0.3. We then estimated location by using GENEFINDER. The most likely location for a gene predisposing to IAs in the Finnish population is in a region with a 95% confidence interval of 11.6 cM (P=.00007) centered 2.0 cM proximal to D19S246.
机译:最近,我们报道了一个受颅内动脉瘤(IAs)影响的48对同胞对的两阶段全基因组筛选,揭示了与19q13染色体的暗示性连锁,LOD得分为2.58。支持链接的区域跨度约为22 cM。在这里,我们报告了对19q13基因座的后续研究,样本量扩展到139个受影响的同胞对,以及83个其他受影响的相对对(总共222个受影响的相对对)。在两个独立的样本组中均观察到暗示性连锁,在组合组中连锁显着,分别为70 cM(LOD得分3.50; P = .00006)和80 cM(LOD得分3.93; P = .00002)。当包括协变量来测量核心家庭中受影响个体的数量时,连锁在70 cM(LOD得分5.70; P = .000001)和80 cM(LOD得分3.99; P = .00005)时非常显着。为了进一步评估具有两个以上受影响亲属的家庭对链接信号的贡献,我们使用隐性模型和一定外显率进行了基于模型的链接分析,并获得了70 cM的最大链接(LOD得分3.16; P = .00007)的渗透率是0.3。然后,我们使用GENEFINDER估算位置。芬兰人群中易患IAs的基因最可能的位置是在以D19S246为中心的2.0 cM为中心的95%置信区间为11.6 cM(P = .00007)的区域。

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