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Evolution of genome size and genomic GC content in carnivorous holokinetics (Droseraceae)

机译:肉食性全运动学中的基因组大小和基因组GC含量的演变

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摘要

>Background and Aims Studies in the carnivorous family Lentibulariaceae in the last years resulted in the discovery of the smallest plant genomes and an unusual pattern of genomic GC content evolution. However, scarcity of genomic data in other carnivorous clades still prevents a generalization of the observed patterns. Here the aim was to fill this gap by mapping genome evolution in the second largest carnivorous family, Droseraceae, where this evolution may be affected by chromosomal holokinetism in Drosera.>Methods The genome size and genomic GC content of 71 Droseraceae species were measured by flow cytometry. A dated phylogeny was constructed, and the evolution of both genomic parameters and their relationship to species climatic niches were tested using phylogeny-based statistics.>Key Results The 2C genome size of Droseraceae varied between 488 and 10 927 Mbp, and the GC content ranged between 37·1 and 44·7 %. The genome sizes and genomic GC content of carnivorous and holocentric species did not differ from those of their non-carnivorous and monocentric relatives. The genomic GC content positively correlated with genome size and annual temperature fluctuations. The genome size and chromosome numbers were inversely correlated in the Australian clade of Drosera.>Conclusions Our results indicate that neither carnivory (nutrient scarcity) nor the holokinetism have a prominent effect on size and DNA base composition of Droseraceae genomes. However, the holokinetic drive seems to affect karyotype evolution in one of the major clades of Drosera. Our survey confirmed that the evolution of GC content is tightly connected with the evolution of genome size and also with environmental conditions.
机译:>背景和目的近年来,对肉食性龙胆科的研究发现了最小的植物基因组,并发现了基因组GC含量变化的异常模式。然而,其他食肉进化枝中基因组数据的缺乏仍然阻止了观察到的模式的泛化。这里的目的是通过绘制第二大食肉类科Droseraceae中的基因组进化图来填补这一空白,该进化过程可能受到Drosera的染色体全基因组学影响。>方法。基因组大小和基因组GC含量为71通过流式细胞术测量了蔷薇科物种。 >关键结果 Droseraceae的2C基因组大小在488和10927 Mbp之间变化,构建了一个过时的系统发育史,并测试了两个基因组参数的演化及其与物种气候生态位的关系。 ,GC含量在37·1和44·7%之间。食肉和全中心物种的基因组大小和基因组GC含量与其非食肉和单中心亲属的基因组大小和基因组GC含量没有差异。基因组GC含量与基因组大小和年度温度波动呈正相关。 >结论我们的结果表明,食肉动物(营养缺乏)和全动力学都不会对菊科植物基因组的大小和DNA碱基组成产生显着影响。 。但是,全动力学驱动似乎影响了Drosera的主要进化枝之一中的核型进化。我们的调查证实,GC含量的变化与基因组大小的变化以及环境条件紧密相关。

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