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γ-Resorcylate Catabolic-Pathway Genes in the Soil Actinomycete Rhodococcus jostii RHA1

机译:土壤放线菌约氏红球菌RHA1中的γ-间苯二酚分解代谢途径基因

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摘要

The Rhodococcus jostii RHA1 gene cluster required for γ-resorcylate (GRA) catabolism was characterized. The cluster includes tsdA, tsdB, tsdC, tsdD, tsdR, tsdT, and tsdX, which encode GRA decarboxylase, resorcinol 4-hydroxylase, hydroxyquinol 1,2-dioxygenase, maleylacetate reductase, an IclR-type regulator, a major facilitator superfamily transporter, and a putative hydrolase, respectively. The tsdA gene conferred GRA decarboxylase activity on Escherichia coli. Purified TsdB oxidized NADH in the presence of resorcinol, suggesting that tsdB encodes a unique NADH-specific single-component resorcinol 4-hydroxylase. Mutations in either tsdA or tsdB resulted in growth deficiency on GRA. The tsdC and tsdD genes conferred hydroxyquinol 1,2-dioxygenase and maleylacetate reductase activities, respectively, on E. coli. Inactivation of tsdT significantly retarded the growth of RHA1 on GRA. The growth retardation was partially suppressed under acidic conditions, suggesting the involvement of tsdT in GRA uptake. Reverse transcription-PCR analysis revealed that the tsd genes constitute three transcriptional units, the tsdBADC and tsdTX operons and tsdR. Transcription of the tsdBADC and tsdTX operons was induced during growth on GRA. Inactivation of tsdR derepressed transcription of the tsdBADC and tsdTX operons in the absence of GRA, suggesting that tsd gene transcription is negatively regulated by the tsdR-encoded regulator. Binding of TsdR to the tsdR-tsdB and tsdT-tsdR intergenic regions was inhibited by the addition of GRA, indicating that GRA interacts with TsdR as an effector molecule.
机译:表征了γ-间苯二酚(GRA)分解代谢所需的约氏红球菌RHA1基因簇。该簇包括tsdA,tsdB,tsdC,tsdD,tsdR,tsdT和tsdX,它们编码GRA脱羧酶,间苯二酚4-羟化酶,羟喹啉1,2-二加氧酶,马来酰乙酸还原酶,IclR型调节剂,主要促进子超家族转运蛋白,和推定的水解酶。 tsdA基因赋予大肠杆菌GRA脱羧酶活性。纯化的TsdB在间苯二酚存在下氧化了NADH,表明tsdB编码独特的NADH特异性单组分间苯二酚4-羟化酶。 tsdA或tsdB中的突变导致GRA的生长缺陷。 tsdC和tsdD基因分别在大肠杆菌上赋予了羟基喹啉1,2-二加氧酶和顺丁烯二乙酸还原酶活性。 tsdT 的失活明显抑制了GRA上RHA1的生长。在酸性条件下,生长迟缓被部分抑制,表明 tsdT 参与了GRA的吸收。逆转录PCR分析表明, tsd 基因由三个转录单元组成,分别是 tsdBADC tsdTX 操纵子以及 tsdR 。 。在GRA上生长期间诱导了 tsdBADC tsdTX 操纵子的转录。在没有GRA的情况下, tsdR 的失活抑制了 tsdBADC tsdTX 操纵子的转录,表明 tsd 基因的转录由 tsdR 编码的调节器负调节。 TsdR与 tsdR-tsdB tsdT-tsdR 基因间区域的结合被GRA的加入抑制,表明GRA与作为效应分子的TsdR相互作用。

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