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Erythromycin Resistance-Conferring Plasmid pRSB105 Isolated from a Sewage Treatment Plant Harbors a New Macrolide Resistance Determinant an Integron-Containing Tn402-Like Element and a Large Region of Unknown Function

机译:从污水处理厂分离的赋予红霉素抗性的质粒pRSB105含有一个新的大环内酯类抗性决定簇一个含有整合子的Tn402样元件以及一个功能未知的大区域

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摘要

The erythromycin resistance plasmid pRSB105 was previously isolated from an activated sludge bacterial community of a municipal wastewater treatment plant. Compilation of the complete pRSB105 nucleotide sequence revealed that the plasmid is 57,137 bp in size and has a mean G+C content of 56.66 mol%. The pRSB105 backbone is composed of two different replication and/or partitioning modules and a functional mobilization region encoding the mobilization genes mobCDE and mobBA. The first replicon (Rep1) is nearly identical to the corresponding replication module of the multiresistance plasmid pRSB101 isolated from an unknown activated sludge bacterium. Accordingly, pRSB101 and pRSB105 are sister plasmids belonging to a new plasmid family. The second replicon (Rep2) of pRSB105 was classified as a member of the IncP-6 group. While Rep1 confers replication ability only in γ-proteobacteria, Rep2 extents the host range of the plasmid since it is also functional in the β-proteobacterium Ralstonia eutropha. Plasmid pRSB105 harbors the macrolide resistance genes mel and mph, encoding, respectively, a predicted ABC-type efflux permease and a macrolide-2′-phosphotransferase. Erythromycin resistance is mainly attributed to mel, whereas mph contributes to erythromycin resistance to a lesser extent. The second resistance region, represented by an integron-containing Tn402-like element, includes a β-lactam (oxa10) and a trimethoprim (dfrB2) resistance gene cassette. In addition to antibiotic resistance modules, pRSB105 encodes a functional restriction/modification system and two nonresistance regions of unknown function. The presence of different mobile genetic elements that flank resistance and nonresistance modules on pRSB105 indicates that these elements were involved in acquisition of accessory plasmid modules. Comparative genomics of pRSB105 and related plasmids elucidated that pRSB105 evolved by integration of distinct modules from different plasmid sources, including Pseudomonas aeruginosa plasmids, and thus represents a mosaic plasmid.
机译:先前从市政污水处理厂的活性污泥细菌群落中分离出红霉素抗性质粒pRSB105。完整的pRSB105核苷酸序列的编译显示,该质粒的大小为57,137 bp,平均G + C含量为56.66 mol%。 pRSB105主链由两个不同的复制和/或分配模块以及编码动员基因mobCDE和mobBA的功能动员区组成。第一复制子(Rep1)与从未知的活性污泥细菌分离的多抗性质粒pRSB101的相应复制模块几乎相同。因此,pRSB101和pRSB105是属于新质粒家族的姐妹质粒。 pRSB105的第二个复制子(Rep2)被归类为IncP-6组的成员。尽管Rep1仅在γ-变形杆菌中赋予复制能力,但是Rep2扩展了质粒的宿主范围,因为它在β-变形杆菌Ralstonia eutropha中也有功能。质粒pRSB105包含大环内酯抗性基因mel和mph,分别编码预测的ABC型外排通透酶和大环内酯2'-磷酸转移酶。红霉素抗性主要归因于mel,而mph对红霉素抗性的影响较小。由含完整子的Tn402样元件代表的第二抗性区域包括β-内酰胺(oxa10)和甲氧苄啶(dfrB2)抗性基因盒。除抗生素抗性模块外,pRSB105还编码功能限制/修饰系统和功能未知的两个非抗性区域。 pRSB105上两侧带有抗性和非抗性模块的不同移动遗传元件的存在表明,这些元件参与了辅助质粒模块的获取。 pRSB105和相关质粒的比较基因组学说明,pRSB105通过整合来自不同质粒来源(包括铜绿假单胞菌质粒)的不同模块而进化,因此代表了一个镶嵌质粒。

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