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Quantitative Detection of Legionella pneumophila in Water Samples by Immunomagnetic Purification and Real-Time PCR Amplification of the dotA Gene

机译:dotA基因的免疫磁纯化和实时PCR扩增定量检测水样中的军团菌

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摘要

A new real-time PCR assay was developed and validated in combination with an immunomagnetic separation system for the quantitative determination of Legionella pneumophila in water samples. Primers that amplify simultaneously an 80-bp fragment of the dotA gene from L. pneumophila and a recombinant fragment including a specific sequence of the gyrB gene from Aeromonas hydrophila, added as an internal positive control, were used. The specificity, limit of detection, limit of quantification, repetitivity, reproducibility, and accuracy of the method were calculated, and the values obtained confirmed the applicability of the method for the quantitative detection of L. pneumophila. Moreover, the efficiency of immunomagnetic separation in the recovery of L. pneumophila from different kinds of water was evaluated. The recovery rates decreased as the water contamination increased (ranging from 59.9% for distilled water to 36% for cooling tower water), and the reproducibility also decreased in parallel to water complexity. The feasibility of the method was evaluated by cell culture and real-time PCR analysis of 60 samples in parallel. All the samples found to be positive by cell culture were also positive by real-time PCR, while only eight samples were found to be positive only by PCR. Finally, the correlation of both methods showed that the number of cells calculated by PCR was 20-fold higher than the culture values. In conclusion, the real-time PCR method combined with immunomagnetic separation provides a sensitive, specific, and accurate method for the rapid quantification of L. pneumophila in water samples. However, the recovery efficiency of immunomagnetic separation should be considered in complex samples.
机译:开发了一种新的实时PCR分析方法,并结合了免疫磁分离系统进行了定量分析,以定量测定水样中的嗜肺军团菌。使用同时扩增来自嗜肺乳杆菌的dotA基因的80 bp片段和包含来自嗜水气单胞菌的gyrB基因的特定序列的重组片段的引物,作为内部阳性对照。计算了该方法的特异性,检出限,定量限,重复性,可重复性和准确性,所获得的值证实了该方法适用于肺炎链球菌的定量检测。此外,还评估了免疫磁分离从不同种类的水中回收嗜肺乳杆菌的效率。随着水污染的增加,回收率降低(从蒸馏水的59.9%到冷却塔水的36%不等),并且可重复性也随着水的复杂性而降低。通过细胞培养和实时PCR分析60个样品,评估了该方法的可行性。通过细胞培养发现阳性的所有样品也通过实时PCR均为阳性,而仅通过PCR发现只有八个样品为阳性。最后,两种方法的相关性表明,通过PCR计算的细胞数比培养值高20倍。总之,实时PCR方法与免疫磁分离相结合,为快速定量分析水样中的嗜肺乳杆菌提供了灵敏,特异和准确的方法。但是,在复杂的样品中应考虑免疫磁分离的回收效率。

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