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The cytoplasmic domain of C-CAM is required for C-CAM-mediated adhesion function: studies of a C-CAM transcript containing an unspliced intron.

机译:C-CAM介导的粘附功能需要C-CAM的胞质域:研究包含未剪接内含子的C-CAM转录本。

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摘要

Cell-CAM105 (also named C-CAM) is a cell surface glycoprotein involved in intercellular adhesion of rat hepatocytes. It has four extracellular immunoglobulin (Ig) domains, a transmembrane domain and a cytoplasmic domain and therefore is a member of the Ig supergene family. We have characterized multiple cDNAs of the C-CAM genes in rat intestine. Sequence analyses showed that rat intestine contained not only the previously reported L-form and S-form C-CAMs (renamed C-CAM1 and C-CAM2 respectively) but also a new isoform, C-CAM3. The C-CAM3 transcript codes for a polypeptide with a truncated C-terminus that lacks 65 amino acids from the previously reported C-CAM1 cytoplasmic domain. Unlike C-CAM1, C-CAM3 did not mediate cell adhesion when expressed in insect cells using the baculoviral expression system. Thus the extra 65 amino acids in the cytoplasmic domain of C-CAM1 are important for adhesion phenotype when expressed in insect cells. Although C-CAM1 and C-CAM2 are encoded by different genes, sequence analysis suggests that C-CAM3 is probably derived from alternative splicing of the C-CAM1 gene. To examine this possibility, we have determined the exon organization of the C-CAM1 gene. C-CAM3 differed from C-CAM1 by the presence of a single unspliced intron which contained a stop codon immediately after the regular splice junction. As a result, translation of C-CAM3 terminates at the point where C-CAM1 and C-CAM3 sequences diverge. To investigate the expression of C-CAM1, C-CAM2 and C-CAM3 in different tissues, we used an RNAase-protection assay to simultaneously assess the levels of expression of these transcripts. Using total RNA prepared from various tissues, we showed that expression of C-CAM3 was tissue-specific, and the C-CAM3 transcript accounted for about 25% of the transcripts derived from the C-CAM1 gene. However, further analysis revealed that C-CAM3 transcript was not present in cytosolic RNA, rather it was enriched in nuclear RNA prepared from hepatocytes. Although C-CAM3 cDNA contains the polyadenylation signal and is polyadenylated, these results indicate that C-CAM3 is probably an incomplete spliced product of C-CAM1 gene.
机译:Cell-CAM105(也称为C-CAM)是一种细胞表面糖蛋白,参与大鼠肝细胞的细胞间粘附。它具有四个细胞外免疫球蛋白(Ig)结构域,一个跨膜结构域和一个胞质结构域,因此是Ig超基因家族的成员。我们已经表征了大鼠肠中C-CAM基因的多个cDNA。序列分析表明,大鼠肠道不仅包含先前报道的L型和S型C-CAM(分别更名为C-CAM1和C-CAM2),还包含新的同种型C-CAM3。 C-CAM3转录本编码具有截短的C-末端的多肽,该多肽缺少先前报道的C-CAM1胞质结构域的65个氨基酸。与C-CAM1不同,使用杆状病毒表达系统在昆虫细胞中表达时,C-CAM3不介导细胞粘附。因此,当在昆虫细胞中表达时,C-CAM1胞质结构域中额外的65个氨基酸对于粘附表型很重要。尽管C-CAM1和C-CAM2由不同的基因编码,但是序列分析表明C-CAM3可能源自C-CAM1基因的可变剪接。为了检查这种可能性,我们确定了C-CAM1基因的外显子组织。 C-CAM3与C-CAM1的不同之处在于,存在一个未剪接的内含子,该内含子在常规剪接连接后立即包含终止密码子。结果,C-CAM3的翻译终止于C-CAM1和C-CAM3序列发散的点。为了研究C-CAM1,C-CAM2和C-CAM3在不同组织中的表达,我们使用了RNA酶保护试验来同时评估这些转录本的表达水平。使用从各种组织制备的总RNA,我们显示C-CAM3的表达是组织特异性的,并且C-CAM3转录本约占C-CAM1基因衍生的转录本的25%。然而,进一步的分析表明,C-CAM3转录本不存在于胞质RNA中,而是富含从肝细胞制备的核RNA中。尽管C-CAM3 cDNA包含聚腺苷酸化信号并被聚腺苷酸化,但这些结果表明C-CAM3可能是C-CAM1基因的不完整剪接产物。

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