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High-Throughput miRNA Sequencing Reveals a Field Effect in Gastric Cancer and Suggests an Epigenetic Network Mechanism

机译:高通量miRNA测序揭示了胃癌的场效应并提出了表观遗传网络机制

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摘要

Field effect in cancer, also called “field cancerization”, attempts to explain the development of multiple primary tumors and locally recurrent cancer. The concept of field effect in cancer has been reinforced, since molecular alterations were found in tumor-adjacent tissues with normal histopatho-logical appearances. With the aim of investigating field effects in gastric cancer (GC), we conducted a high-throughput sequencing of the miRnome of four GC samples and their respective tumor-adjacent tissues and compared them with the miRnome of a gastric antrum sample from patients without GC, assuming that tumor-adjacent tissues could not be considered as normal tissues. The global number of miRNAs and read counts was highest in tumor samples, followed by tumor-adjacent and normal samples. Analyzing the miRNA expression profile of tumor-adjacent miRNA, hsa-miR-3131, hsa-miR-664, hsa-miR-483, and hsa-miR-150 were significantly downregulated compared with the antrum without tumor tissue (P-value < 0.01; fold-change <5). Additionally, hsa-miR-3131, hsa-miR-664, and hsa-miR-150 were downregulated (P-value < 0.001) in all paired samples of tumor and tumor-adjacent tissues, compared with antrum without tumor mucosa. The field effect was clearly demonstrated in gastric carcinogenesis by an epigenetics-based approach, and potential biomarkers of the GC field effect were identified. The elevated expression of miRNAs in adjacent tissues and tumors tissues may indicate that a cascade of events takes place during gastric carcinogenesis, reinforcing the notion of field effects. This phenomenon seems to be linked to DNA methylation patterns in cancer and suggests the involvement of an epigenetic network mechanism.
机译:癌症中的场效应,也称为“场癌”,试图解释多种原发性肿瘤和局部复发性癌症的发展。由于在具有正常组织病理学外观的肿瘤相邻组织中发现了分子改变,因此增强了癌症中场效应的概念。为了研究胃癌(GC)的场效应,我们对四个GC样品及其各自的肿瘤相邻组织的miRnome进行了高通量测序,并将它们与未使用GC的胃窦样品的miRnome进行了比较。假设肿瘤附近的组织不能被视为正常组织。在肿瘤样本中,miRNA的总数和读取计数最高,其次是肿瘤样本和正常样本。与没有肿瘤组织的胃窦相比,分析与肿瘤相邻的miRNA,hsa-miR-3131,hsa-miR-664,hsa-miR-483和hsa-miR-150的miRNA表达谱(P值< 0.01;倍数变化<5)。此外,与无肿瘤粘膜的胃窦相比,在所有成对的肿瘤和肿瘤相邻组织样本中,hsa-miR-3131,hsa-miR-664和hsa-miR-150均被下调(P值<0.001)。通过基于表观遗传学的方法在胃癌发生中清楚地证明了场效应,并确定了GC场效应的潜在生物标志物。 miRNA在邻近组织和肿瘤组织中的表达升高可能表明在胃癌发生过程中发生了一系列事件,从而增强了场效应的概念。这种现象似乎与癌症中的DNA甲基化模式有关,并暗示了表观遗传网络机制的参与。

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