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Infrared Reflection Absorption Spectroscopy of Amphipathic Model Peptides at the Air/Water Interface

机译:气/水界面两亲模型肽的红外反射吸收光谱

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摘要

The linear sequence KLAL (KLALKLALKALKAALKLA-NH2) and its corresponding d,l-isomers k9a10-KLAL (KLALKLALkaLKAALKLA-NH2) and l11k12-KLAL (KLALKLALKAlkAALKLA-NH2) are model compounds for potentially amphipathic α-helical peptides which are able to bind to membranes and to increase the membrane permeability in a structure- and target-dependent manner () We first studied the secondary structure of KLAL and its analogs bound to the air/water using infrared reflection absorption spectroscopy. For the peptide films the shape and position of the amide I and amide II bands indicate that the KLAL adopts at large areas per molecule an α-helical secondary structure, whereas at higher surface pressures or smaller areas it converts into a β-sheet structure. This transition could be observed in the compression isotherm as well as during the adsorption at the air/water interface from the subphase as a function of time. The secondary structures are essentially orientated parallel to the air/water interface. The analogs with d-amino acids in two different positions of the sequence, k9a10-KLAL and l11k12-KLAL, form only β-sheet structures at all surface pressures. The observed results are interpreted using a comparison of hydrophobic moments calculated for α-helices and β-sheets. The differences between the hydrophobic moments calculated using the consensus scale are not large. Using the optimal matching hydrophobicity scale or the whole-residue hydrophobicity scale the β-sheet even has the larger hydrophobic moment.
机译:线性序列KLAL(KLALKLALKALKAALKLA-NH2)及其相应的d,l-异构体k9a10-KLAL(KLALKLALkaLKAALKLA-NH2)和11k12-KLAL(KLALKLALKAlkAALKLA-NH2)是模型化合物,它们能够与潜在的两亲性α-螺旋肽结合膜,并以结构和目标依赖的方式增加膜的渗透性()我们首先使用红外反射吸收光谱法研究了KLAL及其与空气/水结合的类似物的二级结构。对于肽膜,酰胺I和酰胺II谱带的形状和位置表明KLAL在每个分子上具有大面积的α-螺旋二级结构,而在较高的表面压力或较小的面积上,它会转变为β-折叠结构。这种转变可以在压缩等温线以及子阶段在空气/水界面的吸附过程中随时间变化观察到。二级结构基本上平行于空气/水界面定向。在序列的两个不同位置具有d-氨基酸的类似物k9a10-KLAL和11k12-KLAL在所有表面压力下仅形成β-折叠结构。使用对α螺旋和β折叠计算的疏水矩的比较来解释观察到的结果。使用共识尺度计算的疏水力矩之间的差异不大。使用最佳匹配疏水度标度或整个残基疏水度标度,β-折叠甚至具有更大的疏水力矩。

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