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The conformation of serum albumin in solution: a combined phosphorescence depolarization-hydrodynamic modeling study.

机译:溶液中血清白蛋白的构象:组合的磷光去极化-流体动力学模型研究。

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摘要

There is a striking disparity between the heart-shaped structure of human serum albumin (HSA) observed in single crystals and the elongated ellipsoid model used for decades to interpret the protein solution hydrodynamics at neutral pH. These two contrasting views could be reconciled if the protein were flexible enough to change its conformation in solution from that found in the crystal. To investigate this possibility we recorded the rotational motions in real time of an erythrosin-bovine serum albumin complex (Er-BSA) over an extended time range, using phosphorescence depolarization techniques. These measurements are consistent with the absence of independent motions of large protein segments in solution, in the time range from nanoseconds to fractions of milliseconds, and give a single rotational correlation time phi(BSA, 1 cP, 20 degrees C) = 40 +/- 2 ns. In addition, we report a detailed analysis of the protein hydrodynamics based on two bead-modeling methods. In the first, BSA was modeled as a triangular prismatic shell with optimized dimensions of 84 x 84 x 84 x 31.5 A, whereas in the second, the atomic-level structure of HSA obtained from crystallographic data was used to build a much more refined rough-shell model. In both cases, the predicted and experimental rotational diffusion rate and other hydrodynamic parameters were in good agreement. Therefore, the overall conformation in neutral solution of BSA, as of HSA, should be rigid, in the sense indicated above, and very similar to the heart-shaped structure observed in HSA crystals.
机译:在单晶中观察到的人血清白蛋白(HSA)的心形结构与数十年来用于解释中性pH值的蛋白质溶液流体动力学的细长椭圆体模型之间存在显着差异。如果蛋白质具有足够的柔韧性,可以从晶体中发现溶液中改变其构象,则可以调和这两种相反的观点。为了研究这种可能性,我们使用磷光去极化技术在延长的时间范围内实时记录了赤字-牛血清白蛋白复合物(Er-BSA)的旋转运动。这些测量与溶液中不存在大蛋白片段的独立运动一致,时间范围从纳秒到毫秒,并且给出单个旋转相关​​时间phi(BSA,1 cP,20摄氏度)= 40 + / -2 ns。此外,我们报告了基于两种磁珠建模方法的蛋白质流体动力学的详细分析。首先,将BSA建模为具有优化尺寸为84 x 84 x 84 x 31.5 A的三棱柱形外壳,而在第二个中,使用从晶体学数据获得的HSA原子级结构来构建更精细的毛坯壳模型。在这两种情况下,预测的和实验的旋转扩散速率以及其他流体动力学参数都非常吻合。因此,就上述意义而言,BSA(如HSA)在中性溶液中的整体构象应是刚性的,并且与在HSA晶体中观察到的心形结构非常相似。

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