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A systems approach for analysis of high content screening assay data with topic modeling

机译:使用主题建模分析高含量筛选测定数据的系统方法

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摘要

BackgroundHigh Content Screening (HCS) has become an important tool for toxicity assessment, partly due to its advantage of handling multiple measurements simultaneously. This approach has provided insight and contributed to the understanding of systems biology at cellular level. To fully realize this potential, the simultaneously measured multiple endpoints from a live cell should be considered in a probabilistic relationship to assess the cell's condition to response stress from a treatment, which poses a great challenge to extract hidden knowledge and relationships from these measurements.
机译:背景高含量筛选(HCS)已成为毒性评估的重要工具,部分原因是它具有同时处理多个测量值的优势。这种方法提供了见识,并有助于在细胞水平上理解系统生物学。为了充分发挥这种潜力,应该以概率关系考虑从活细胞中同时测量的多个端点,以评估细胞对治疗产生的应激反应的状况,这对从这些测量中提取隐藏的知识和关系构成了巨大挑战。

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