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Development of a versatile enrichment analysis tool reveals associations between the maternal brain and mental health disorders including autism

机译:多功能浓缩分析工具的开发揭示了孕产妇大脑与心理健康障碍(包括自闭症)之间的关联

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摘要

BackgroundA recent study of lateral septum (LS) suggested a large number of autism-related genes with altered expression in the postpartum state. However, formally testing the findings for enrichment of autism-associated genes proved to be problematic with existing software. Many gene-disease association databases have been curated which are not currently incorporated in popular, full-featured enrichment tools, and the use of custom gene lists in these programs can be difficult to perform and interpret. As a simple alternative, we have developed the Modular Single-set Enrichment Test (MSET), a minimal tool that enables one to easily evaluate expression data for enrichment of any conceivable gene list of interest.
机译:背景技术最近对侧隔(LS)的研究表明,大量自闭症相关基因在产后状态表达发生改变。但是,对现有的软件进行形式化的自闭症相关基因富集测试被证明存在问题。已经建立了许多基因-疾病关联数据库,这些数据库目前未包含在流行的功能齐全的富集工具中,在这些程序中使用自定义基因列表可能难以执行和解释。作为一种简单的替代方法,我们开发了模块化单组富集测试(MSET),这是一种最小的工具,使人们能够轻松评估表达数据以丰富任何可能的目标基因列表。

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