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Graduate Training at the Interface of Computational and Experimental Biology: An Outcome Report from a Partnership of Volunteers between a University and a National Laboratory

机译:计算生物学和实验生物学交界的研究生培训:大学与国家实验室之间的志愿者合作关系成果报告

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摘要

Leading voices in the biological sciences have called for a transformation in graduate education leading to the PhD degree. One area commonly singled out for growth and innovation is cross-training in computational science. In 1998, the University of Tennessee (UT) founded an intercollegiate graduate program called the UT-ORNL Graduate School of Genome Science and Technology in partnership with the nearby Oak Ridge National Laboratory. Here, we report outcome data that attest to the program’s effectiveness in graduating computationally enabled biologists for diverse careers. Among 77 PhD graduates since 2003, the majority came with traditional degrees in the biological sciences, yet two-thirds moved into computational or hybrid (computational–experimental) positions. We describe the curriculum of the program and how it has changed. We also summarize how the program seeks to establish cohesion between computational and experimental biologists. This type of program can respond flexibly and dynamically to unmet training needs. In conclusion, this study from a flagship, state-supported university may serve as a reference point for creating a stable, degree-granting, interdepartmental graduate program in computational biology and allied areas.
机译:生物科学领域的领导者呼吁改变研究生学位以取得博士学位。通常被选作增长和创新的领域之一是计算机科学的交叉培训。 1998年,田纳西大学(UT)与附近的橡树岭国家实验室(Oak Ridge National Laboratory)合作建立了一个大学间研究生计划,称为UT-ORNL基因组科学与技术研究生院。在这里,我们报告的结果数据证明了该计划在毕业于计算机领域的生物学家从事各种职业的有效性。自2003年以来,在77名博士毕业生中,大多数人获得了生物科学的传统学位,但三分之二移交给了计算或混合(计算-实验)职位。我们描述了该计划的课程及其变化。我们还总结了该程序如何寻求建立计算生物学和实验生物学家之间的凝聚力。这种类型的程序可以灵活,动态地响应未满足的培训需求。总而言之,这项来自国立旗舰大学的研究可以作为在计算生物学和相关领域建立稳定,授予学位,跨部门研究生计划的参考。

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