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Characterization of Flagellotropic Chi-Like Salmonella Phages Isolated from Thai Poultry Farms

机译:从泰国家禽养殖场分离出鞭毛Chi-like沙门氏菌噬菌体的表征

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摘要

Despite a wealth of knowledge on Salmonella phages worldwide, little is known about poultry-associated Salmonella phages from Thailand. Here, we isolated 108 phages from Thai poultry farms that infect Salmonella enterica serovar Typhimurium. Phages STm101 and STm118 were identified as temperate Siphoviridae phages. Genome sequencing and analyses revealed these phages share approximately 96% nucleotide sequence similarity to phage SPN19, a member of the Chi-like virus genus. PCR amplification of the gene encoding capsid protein E of the Chi-like phage was positive for 50% of phage isolates, suggesting a predominance of this phage type among the sampled poultry farms. In addition to the flagella, two phages required the lipopolysaccharide to infect and lyse Salmonella. Furthermore, phylogenomic analysis demonstrated that phages STm101 and STm118 formed a monophyletic clade with phages isolated from Western countries, but not from closer isolated phages from Korea. However, further investigation and more phage isolates are required to investigate possible causes for this geographic distribution.
机译:尽管在全球范围内对沙门氏菌噬菌体有丰富的知识,但对泰国家禽相关的沙门氏菌噬菌体知之甚少。在这里,我们从泰国的家禽养殖场中分离了108个噬菌体,这些噬菌体感染了沙门氏菌血清型鼠伤寒沙门氏菌。噬菌体STm101和STm118被鉴定为温带Siphoviridae噬菌体。基因组测序和分析表明,这些噬菌体与Chi-like病毒属成员噬菌体SPN19具有大约96%的核苷酸序列相似性。 Chi样噬菌体的衣壳蛋白E编码基因的PCR扩增对50%的噬菌体分离株呈阳性,这表明这种噬菌体类型在抽样的家禽养殖场中占主导地位。除了鞭毛,还有两个噬菌体需要脂多糖感染和裂解沙门氏菌。此外,系统生物学分析表明,噬菌体STm101和STm118与西方国家的噬菌体形成了单系进化枝,而韩国分离的噬菌体则没有。但是,需要进一步的调查和更多的噬菌体分离物来调查这种地理分布的可能原因。

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