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Novel Parvoviruses from Wild and Domestic Animals in Brazil Provide New Insights into Parvovirus Distribution and Diversity

机译:来自巴西野生和家畜的新型细小病毒为细小病毒的分布和多样性提供了新见解

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摘要

Parvoviruses (family Parvoviridae) are small, single-stranded DNA viruses. Many parvoviral pathogens of medical, veterinary and ecological importance have been identified. In this study, we used high-throughput sequencing (HTS) to investigate the diversity of parvoviruses infecting wild and domestic animals in Brazil. We identified 21 parvovirus sequences (including twelve nearly complete genomes and nine partial genomes) in samples derived from rodents, bats, opossums, birds and cattle in Pernambuco, São Paulo, Paraná and Rio Grande do Sul states. These sequences were investigated using phylogenetic and distance-based approaches and were thereby classified into eight parvovirus species (six of which have not been described previously), representing six distinct genera in the subfamily Parvovirinae. Our findings extend the known biogeographic range of previously characterized parvovirus species and the known host range of three parvovirus genera (Dependovirus, Aveparvovirus and Tetraparvovirus). Moreover, our investigation provides a window into the ecological dynamics of parvovirus infections in vertebrates, revealing that many parvovirus genera contain well-defined sub-lineages that circulate widely throughout the world within particular taxonomic groups of hosts.
机译:细小病毒(Parvoviridae家族)是小的单链DNA病毒。已经鉴定出许多具有医学,兽医和生态重要性的细小病毒病原体。在这项研究中,我们使用高通量测序(HTS)来研究细小病毒感染巴西野生和家养动物的多样性。我们从伯南布哥州,圣保罗州,巴拉那州和南里奥格兰德州的啮齿动物,蝙蝠,负鼠,鸟类和牛的样品中鉴定出21种细小病毒序列(包括12个几乎完整的基因组和9个部分基因组)。使用系统发育和基于距离的方法研究了这些序列,从而将它们分类为八种细小病毒种(其中六种以前没有描述过),代表了细小病毒亚科中的六个不同属。我们的发现扩展了先前表征的细小病毒种的已知生物地理范围,以及三种细小病毒属(Dependovirus,Aveparvovirus和Tetraparvovirus)的已知宿主范围。此外,我们的研究为了解脊椎动物细小病毒感染的生态动态提供了一个窗口,揭示了许多细小病毒属包含明确定义的亚谱系,这些谱系在特定分类学宿主群中广泛分布于世界各地。

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