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Detection of Non-PCR Amplified S. enteritidis Genomic DNA from Food Matrices Using a Gold-Nanoparticle DNA Biosensor: A Proof-of-Concept Study

机译:使用金纳米颗粒DNA生物传感器从食品基质中检测非PCR扩增的肠炎沙门氏菌基因组DNA:概念验证研究

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摘要

Bacterial pathogens pose an increasing food safety and bioterrorism concern. Current DNA detection methods utilizing sensitive nanotechnology and biosensors have shown excellent detection, but require expensive and time-consuming polymerase chain reaction (PCR) to amplify DNA targets; thus, a faster, more economical method is still essential. In this proof-of-concept study, we investigated the ability of a gold nanoparticle-DNA (AuNP-DNA) biosensor to detect non-PCR amplified genomic Salmonella enterica serovar Enteritidis (S. enteritidis) DNA, from pure or mixed bacterial culture and spiked liquid matrices. Non-PCR amplified DNA was hybridized into sandwich-like structures (magnetic nanoparticles/DNA/AuNPs) and analyzed through detection of gold voltammetric peaks using differential pulse voltammetry. Our preliminary data indicate that non-PCR amplified genomic DNA can be detected at a concentration as low as 100 ng/mL from bacterial cultures and spiked liquid matrices, similar to reported PCR amplified detection levels. These findings also suggest that AuNP-DNA biosensors are a first step towards a viable detection method of bacterial pathogens, in particular, for resource-limited settings, such as field-based or economically limited conditions. Future efforts will focus on further optimization of the DNA extraction method and AuNP-biosensors, to increase sensitivity at lower DNA target concentrations from food matrices comparable to PCR amplified DNA detection strategies.
机译:细菌病原体引起食品安全和生物恐怖主义的关注。当前利用敏感的纳米技术和生物传感器的DNA检测方法已显示出出色的检测效果,但需要昂贵且耗时的聚合酶链反应(PCR)来扩增DNA靶标。因此,仍然需要一种更快,更经济的方法。在此概念验证研究中,我们研究了金纳米粒子DNA(AuNP-DNA)生物传感器检测纯或混合细菌培养物中非PCR扩增的基因组肠炎沙门氏菌肠炎沙门氏菌(肠炎沙门氏菌)DNA的能力。加标液体基质。将非PCR扩增的DNA杂交成三明治状结构(磁性纳米颗粒/ DNA / AuNPs),并通过使用差分脉冲伏安法检测金伏安峰进行分析。我们的初步数据表明,可以从细菌培养物和加标的液体基质中检测到浓度低至100 ng / mL的非PCR扩增基因组DNA,与报道的PCR扩增检测水平相似。这些发现还表明,AuNP-DNA生物传感器是朝着可行的细菌病原体检测方法迈出的第一步,特别是对于资源有限的环境,例如基于田地或经济上有限的条件。未来的工作将集中在进一步优化DNA提取方法和AuNP生物传感器上,以提高与PCR扩增DNA检测策略相当的食品基质中较低DNA靶浓度时的灵敏度。

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