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Multiple phase transitions in an agent-based evolutionary model with neutral fitness

机译:具有中性适应性的基于代理的进化模型中的多相变

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摘要

Null models are crucial for understanding evolutionary processes such as speciation and adaptive radiation. We analyse an agent-based null model, considering a case without selection—neutral evolution—in which organisms are defined only by phenotype. Universal dynamics has previously been demonstrated in a related model on a neutral fitness landscape, showing that this system belongs to the directed percolation (DP) universality class. The traditional null condition of neutral fitness (where fitness is defined as the number of offspring each organism produces) is extended here to include equal probability of death among organisms. We identify two types of phase transition: (i) a non-equilibrium DP transition through generational time (i.e. survival), and (ii) an equilibrium ordinary percolation transition through the phenotype space (based on links between mating organisms). Owing to the dynamical rules of the DP reaction–diffusion process, organisms can only sparsely fill the phenotype space, resulting in significant phenotypic diversity within a cluster of mating organisms. This highlights the necessity of understanding hierarchical evolutionary relationships, rather than merely developing taxonomies based on phenotypic similarity, in order to develop models that can explain phylogenetic patterns found in the fossil record or to make hypotheses for the incomplete fossil record of deep time.
机译:空模型对于理解进化过程(例如物种形成和适应性辐射)至关重要。我们分析了基于代理的无效模型,考虑了没有选择的情况(中性进化),在这种情况下,仅根据表型定义生物。先前已在中性健身环境的相关模型中证明了通用动力学,表明该系统属于定向渗透(DP)通用性类别。中性适应度的传统无效条件(适应度定义为每个生物体产生的后代数量)在此扩展为包括生物体之间相等的死亡概率。我们确定了两种类型的相变:(i)通过世代时间(即生存)的非平衡DP过渡,以及(ii)通过表型空间的平衡普通渗流过渡(基于交配生物之间的联系)。由于DP反应扩散过程的动力学规律,生物只能稀疏地填充表型空间,从而在交配生物群中产生显着的表型多样性。这突显了理解分层进化关系的必要性,而不是仅仅根据表型相似性发展分类法,而是为了开发可以解释化石记录中发现的系统发育模式的模型或为深时期不完整的化石记录做出假设。

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