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Thermodynamic and structural investigation of the specific SDS binding of humicola insolens cutinase

机译:Humicola insolens角质酶特异性SDS结合的热力学和结构研究

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摘要

The interaction of lipolytic enzymes with anionic surfactants is of great interest with respect to industrially produced detergents. Here, we report the interaction of cutinase from the thermophilic fungus Humicola insolens with the anionic surfactant SDS, and show the enzyme specifically binds a single SDS molecule under nondenaturing concentrations. Protein interaction with SDS was investigated by NMR, ITC and molecular dynamics simulations. The NMR resonances of the protein were assigned, with large stretches of the protein molecule not showing any detectable resonances. SDS is shown to specifically interact with the loops surrounding the catalytic triad with medium affinity (Ka ≈ 105 M−1). The mode of binding is closely similar to that seen previously for binding of amphiphilic molecules and substrate analogues to cutinases, and hence SDS acts as a substrate mimic. In addition, the structure of the enzyme has been solved by X-ray crystallography in its apo form and after cocrystallization with diethyl p-nitrophenyl phosphate (DNPP) leading to a complex with monoethylphosphate (MEP) esterified to the catalytically active serine. The enzyme has the same fold as reported for other cutinases but, unexpectedly, esterification of the active site serine is accompanied by the ethylation of the active site histidine which flips out from its usual position in the triad.
机译:对于工业生产的洗涤剂,脂解酶与阴离子表面活性剂的相互作用引起了极大的兴趣。在这里,我们报道了来自嗜热真菌腐质霉(Humicola insolens)的角质酶与阴离子表面活性剂SDS的相互作用,并显示了该酶在非变性浓度下特异性结合单个SDS分子。通过NMR,ITC和分子动力学模拟研究了蛋白质与SDS的相互作用。分配了蛋白质的NMR共振,大部分蛋白质分子未显示任何可检测到的共振。结果表明,SDS以中等亲和力(Ka≈10 5 M -1 )与催化三联体周围的环特异性相互作用。结合方式与先前将两亲性分子和底物类似物结合到角质酶上的方式非常相似,因此SDS充当底物模拟物。另外,该酶的结构已经通过X射线晶体学以其脱辅基形式解决,并且在与二乙基对硝基苯基磷酸酯(DNPP)共结晶之后,导致与磷酸单乙酯(MEP)的复合物酯化为催化活性丝氨酸。该酶具有与其他角质酶相同的倍数,但是出乎意料的是,活性位点丝氨酸的酯化伴随有活性位点组氨酸的乙基化,该乙基化从其在三联体中的通常位置翻转出来。

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