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The effects of cosolutes on protein dynamics: The reversal of denaturant-induced protein fluctuations by trimethylamine N-oxide

机译:溶质对蛋白质动力学的影响:三甲胺N-氧化物逆转变性剂诱导的蛋白质波动

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摘要

The protein stabilizing effects of the small molecule osmolyte, trimethylamine N-oxide, against chemical denaturant was investigated by NMR spin-relaxation measurements and model-free analysis. In the presence of 0.7 M guanidine hydrochloride increased picosecond-nanosecond dynamics are observed in the protein ribonuclease A. These increased fluctuations occur throughout the protein, but the most significant increases in flexibility occur at positions believed to be the first to unfold. Addition of 0.35 M trimethylamine N-oxide to this destabilized form of ribonuclease results in significant rigidification of the protein backbone as assessed by 1H-15N order parameters. Statistically, these order parameters are the same as those measured in native ribonuclease indicating that TMAO reduces the amplitude of backbone fluctuations in a destabilized protein. These data suggest that TMAO restricts the bond vector motions on the protein energy landscape to resemble those motions that occur in the native protein and points to a relation between stability and dynamics in this enzyme.
机译:通过NMR自旋弛豫测量和无模型分析研究了小分子渗透液三甲胺N-氧化物对化学变性剂的蛋白质稳定作用。在存在0.7 M盐酸胍的情况下,在蛋白质核糖核酸酶A中观察到了皮秒-纳秒级动力学的增加。这些增加的波动发生在整个蛋白质中,但是柔韧性的最显着增加发生在被认为最先出现的位置。通过 1 H- 15 N顺序参数评估,在这种不稳定的核糖核酸酶形式中加入0.35 M三甲胺N-氧化物会导致蛋白质骨架的显着刚性化。从统计学上讲,这些顺序参数与在天然核糖核酸酶中测得的参数相同,这表明TMAO减少了不稳定蛋白中骨架波动的幅度。这些数据表明,TMAO将结合载体的运动限制在蛋白质能量图景上,类似于天然蛋白质中发生的那些运动,并指出了该酶的稳定性和动力学之间的关系。

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