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An imprinted transcript antisense to Nesp adds complexity to the cluster of imprinted genes at the mouse Gnas locus

机译:印记转录本与Nesp反义增加了小鼠Gnas基因座上印记基因簇的复杂性

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摘要

The Gnas locus in distal mouse chromosome (Chr) 2 is emerging as a complex genomic region. It contains three imprinted genes in the order Nesp-Gnasxl-Gnas. Gnas encodes a G protein α-subunit, and Nesp and Gnasxl encode proteins of unknown function expressed in neuroendocrine tissue. Together, these genes form a single transcription unit because transcripts of Nesp and Gnasxl are alternatively spliced onto exon 2 of Gnas. Nesp and Gnasxl are expressed from opposite parental alleles, with Nesp encoding a maternal-specific transcript and Gnasxl encoding a paternal-specific transcript. We now identify a further imprinted transcript in this cluster. Reverse transcription–PCR analysis of Nesp expression in 15.5-days-postcoitum embryos carrying only maternal or paternal copies of distal Chr 2 revealed an isoform that is exclusively paternally, rather than maternally, expressed. Strand-specific reverse transcription–PCR showed that this form is an antisense transcript. The existence of a paternally expressed antisense transcript was confirmed by Northern blot analysis. The sequence is contiguous with genomic sequence downstream of Nesp and encompasses Nesp exons 1 and 2 and an intervening intron. We propose that Nespas is an additional control element in the imprinting region of mouse distal Chr 2; it adds further complexity to the Gnas-imprinted gene cluster.
机译:远端小鼠染色体(Chr)2中的Gnas基因座正在形成一个复杂的基因组区域。它包含以Nesp-Gnasxl-Gnas顺序排列的三个印迹基因。 Gnas编码G蛋白α亚基,Nesp和Gnasxl编码在神经内分泌组织中表达的功能未知的蛋白。这些基因一起形成了一个单一的转录单元,因为Nesp和Gnasxl的转录物被选择性地剪接到Gnas的外显子2上。 Nesp和Gnasxl从相反的亲本等位基因表达,其中Nesp编码母本特异性转录本,而Gnasxl编码母本特异性转录本。现在,我们在该簇中鉴定出一个进一步的转录本。在仅携带母本或父本拷贝的Chr 2远端的15.5天后宫腔胚胎中,Nesp表达的反转录PCR分析表明,该同种型仅在母本而不是母本中表达。链特异性逆转录-PCR显示该形式是反义转录物。通过Northern印迹分析证实了父本表达的反义转录物的存在。该序列与Nesp下游的基因组序列相邻,并且包含Nesp外显子1和2和一个插入的内含子。我们建议Nespas是鼠标远端Chr 2的印迹区域中的一个额外的控制元素;它增加了 Gnas 印迹基因簇的复杂性。

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