首页> 美国卫生研究院文献>Neuro-Oncology >P04.19 Recommendations for computation of textural measures obtained from 3D brain tumor MRIs: A robustness analysis points out the need for standardization.
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P04.19 Recommendations for computation of textural measures obtained from 3D brain tumor MRIs: A robustness analysis points out the need for standardization.

机译:P04.19计算从3D脑肿瘤MRI获得的纹理量度的建议:稳健性分析指出需要标准化。

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摘要

>Introduction: Textural analysis refers to a variety of mathematical methods used to quantify the spatial variations in grey levels within images. In brain tumors, textural features have a great potential as imaging biomarkers having been shown to correlate with survival, tumor grade, tumor type, etc. However, these measures should be reproducible under dynamic range and matrix size changes for their clinical use. Our aim is to study this robustness in brain tumors with 3D magnetic resonance imaging, not previously reported in the literature. >Materials and methods: 3D T1-weighted images of 20 patients with glioblastoma (64.80 ± 9.12 years-old) obtained from a 3T scanner were analyzed. Tumors were segmented using an in-house semi-automatic 3D procedure. A set of 16 3D textural features of the most common types (co-occurrence and run-length matrices) were selected, providing regional (run-length based measures) and local information (co-ocurrence matrices) on the tumor heterogeneity. Feature robustness was assessed by means of the coefficient of variation (CV) under both dynamic range (16, 32 and 64 gray levels) and/or matrix size (256x256 and 432x432) changes. >Results: None of the textural features considered were robust under dynamic range changes. The textural co-occurrence matrix feature Entropy was the only textural feature robust (CV < 10%) under spatial resolution changes. >Conclusions: In general, textural measures of three-dimensional brain tumor images are neither robust under dynamic range nor under matrix size changes. Thus, it becomes mandatory to fix standards for image rescaling after acquisition before the textural features are computed if they are to be used as imaging biomarkers. For T1-weighted images a dynamic range of 16 grey levels and a matrix size of 256x256 (and isotropic voxel) is found to provide reliable and comparable results and is feasible with current MRI scanners. The implications of this work go beyond the specific tumor type and MRI sequence studied here and pose the need for standardization in textural feature calculation of oncological images.FUNDING: James S. Mc. Donnell Foundation (USA) 21st Century Science Initiative in Mathematical and Complex Systems Approaches for Brain Cancer [Collaborative award 220020450 and planning grant 220020420], MINECO/FEDER [MTM2015-71200-R], JCCM [PEII-2014-031-P].
机译:>简介:纹理分析是指用于量化图像中灰度级空间变化的各种数学方法。在脑肿瘤中,质地特征具有巨大的潜力,因为已显示成像生物标志物与存活率,肿瘤等级,肿瘤类型等相关。但是,这些措施在动态范围和基质尺寸变化下应可重现,以用于临床。我们的目标是使用3D磁共振成像技术研究脑肿瘤中的这种鲁棒性,这是以前文献中未曾报道过的。 >材料和方法:分析了从3T扫描仪获得的20例胶质母细胞瘤患者(64.80±9.12岁)的3D T1加权图像。使用内部半自动3D程序对肿瘤进行分割。选择了一组最常见的16种3D纹理特征(共现和游程矩阵),提供了关于肿瘤异质性的区域性(基于游程的量度)和局部信息(共现矩阵)。通过在动态范围(16、32和64灰度级)和/或矩阵大小(256x256和432x432)变化下的变异系数(CV)评估特征的鲁棒性。 >结果:在动态范围变化下,所有考虑的纹理特征都不具有鲁棒性。纹理同现矩阵特征熵是在空间分辨率变化下唯一健壮的纹理特征(CV <10%)。 >结论:通常,三维脑肿瘤图像的纹理测量在动态范围和矩阵大小变化下都不可靠。因此,如果要将纹理特征用作成像生物标记,则必须在获取纹理特征之前固定获取后图像缩放的标准。对于T1加权图像,发现16灰度级的动态范围和256x256的矩阵大小(和各向同性体素)可提供可靠且可比较的结果,并且对于当前的MRI扫描仪是可行的。这项工作的意义超出了此处研究的特定肿瘤类型和MRI序列的范围,并提出了在肿瘤图像的纹理特征计算中实现标准化的需求。 Donnell基金会(美国)脑癌数学和复杂系统方法的21世纪科学计划[协作奖220020450和计划拨款220020420],MINECO / FEDER [MTM2015-71200-R],JCCM [PEII-2014-031-P]。

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