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Evaluation of Bovine chemerin (RARRES2) Gene Variation on Beef Cattle Production Traits

机译:牛chemerin(RARRES2)基因变异对肉牛生产性状的评价

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摘要

A previous study in cattle based on >48,000 markers identified markers on chromosome 4 near the chemerin gene associated with average daily feed intake (ADFI) in steers (P < 0.008). Chemerin is an adipokine associated with obesity and metabolic syndrome in humans, representing a strong candidate gene potentially underlying the observed association. To evaluate whether the bovine chemerin gene is involved in feed intake, 16 markers within and around the gene were tested for association in the same resource population. Eleven were nominally significant for ADFI (P < 0.05) and two were significant after Bonferroni correction. Two and five SNP in this region were nominally significant for the related traits of average daily gain (ADG) and residual feed intake (RFI), respectively. All markers were evaluated for effects on meat quality and carcass phenotypes. Many of the markers associated with ADFI were associated with hot carcass weight (HCW), adjusted fat thickness (AFT), and marbling (P < 0.05). Marker alleles that were associated with lower ADFI were also associated with lower HCW, AFT, and marbling. Markers associated with ADFI were genotyped in a validation population of steers representing 14 breeds to determine predictive merit across populations. No consistent relationships for ADFI were detected. To determine whether cattle feed intake or growth phenotypes might be related to chemerin transcript abundance, the expression of chemerin was evaluated in adipose of 114 heifers that were siblings of the steers in the discovery population. Relative chemerin transcript abundance was not correlated with ADFI, ADG, or RFI, but associations with body condition score and yearling weight were observed. We conclude that variation in the chemerin gene may underlie observed association in the resource population, but that additional research is required to determine if this variation is widespread among breeds and to develop robust markers with predictive merit across breeds.
机译:先前一项基于> 48,000个标记的牛研究发现,与牛平均日采食量(ADFI)相关的chemerin基因附近的4号染色体上标记(P <0.008)。 Chemerin是一种与人的肥胖和代谢综合症有关的脂肪因子,代表潜在的潜在关联。为了评估牛凯莫瑞基因是否与饲料摄入有关,测试了该基因内部和周围的16个标记在同一资源种群中的关联。 ADFI名义上有11个显着性意义(P <0.05),Bonferroni矫正后有2个显着性意义。该区域的两个和五个SNP在名义上分别对平均日增重(ADG)和残余饲料摄入量(RFI)的相关性显着。评价所有标记物对肉品质和car体表型的影响。与ADFI相关的许多标志物与hot体热重(HCW),调节脂肪厚度(AFT)和大理石花纹有关(P <0.05)。与较低ADFI相关的标记等位基因也与较低HCW,AFT和大理石花纹相关。在代表14个品种的验证公牛群体中对与ADFI相关的标记进行基因分型,以确定跨群体的预测优势。未检测到ADFI的一致关系。为了确定牛的采食量或生长表型是否可能与凯莫瑞转录本的丰度相关,在发现种群中114头小母牛的脂肪中评估了凯莫瑞的表达。相对凯莫瑞转录本丰度与ADFI,ADG或RFI不相关,但观察到与身体状况评分和一岁体重相关。我们得出的结论是,chemerin基因的变异可能是资源种群中观察到的关联的基础,但是还需要进行进一步的研究,以确定这种变异是否在各个品种之间广泛存在,并开发出具有跨品种预测价值的可靠标记。

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