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Polygenic Control of Carotid Atherosclerosis in a BALB/cJ × SM/J Intercross and a Combined Cross Involving Multiple Mouse Strains

机译:BALB / cJ×SM / J杂交和组合杂交涉及多个小鼠品系的颈动脉粥样硬化的多基因控制

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摘要

Atherosclerosis in the carotid arteries is a major cause of ischemic stroke, which accounts for 85% of all stroke cases. Genetic factors contributing to carotid atherosclerosis remain poorly understood. The aim of this study was to identify chromosomal regions harboring genes contributing to carotid atherosclerosis in mice. From an intercross between BALB/cJ (BALB) and SM/J (SM) apolipoprotein E-deficient (Apoe−/−) mice, 228 female F2 mice were generated and fed a “Western” diet for 12 wk. Atherosclerotic lesion sizes in the left carotid artery were quantified. Across the entire genome, 149 genetic markers were genotyped. Quantitative trait locus (QTL) analysis revealed eight loci for carotid lesion sizes, located on chromosomes 1, 5, 12, 13, 15, 16, and 18. Combined cross-linkage analysis using data from this cross, and two previous F2 crosses derived from BALB, C57BL/6J and C3H/HeJ strains, identified five significant QTL on chromosomes 5, 9, 12, and 13, and nine suggestive QTL for carotid atherosclerosis. Of them, the QTL on chromosome 12 had a high LOD score of 9.95. Bioinformatic analysis prioritized Arhgap5, Akap6, Mipol1, Clec14a, Fancm, Nin, Dact1, Rtn1, and Slc38a6 as probable candidate genes for this QTL. Atherosclerotic lesion sizes were significantly correlated with non-HDL cholesterol levels (r = 0.254; p = 0.00016) but inversely correlated with HDL cholesterol levels (r = −0.134; p = 0.049) in the current cross. Thus, we demonstrated the polygenic control of carotid atherosclerosis in mice. The correlations of carotid lesion sizes with non-HDL and HDL suggest that genetic factors exert effects on carotid atherosclerosis partially through modulation of lipoprotein homeostasis.
机译:颈动脉粥样硬化是缺血性中风的主要原因,占所有中风病例的85%。导致颈动脉粥样硬化的遗传因素仍然知之甚少。这项研究的目的是确定包含有助于小鼠颈动脉粥样硬化的基因的染色体区域。从BALB / cJ(BALB)与SM / J(SM)载脂蛋白E缺乏(Apoe -/-)小鼠的交配中,产生了228只雌性F2小鼠,并喂食了“西方”饮食12周。量化左颈动脉中的动脉粥样硬化病变大小。在整个基因组中,对149个遗传标记进行了基因分型。数量性状基因座(QTL)分析揭示了8个颈动脉病变大小的基因座,分别位于第1、5、12、13、15、16和18号染色体上。结合交叉链接分析,使用了来自该杂交的数据,并获得了两个先前的F2杂交来自BALB,C57BL / 6J和C3H / HeJ菌株的菌株在5号,9号,12号和13号染色体上鉴定出五个重要的QTL,以及九个提示颈动脉粥样硬化的提示性QTL。其中,第12号染色体上的QTL的LOD得分较高,为9.95。生物信息学分析将Arhgap5,Akap6,Mipol1,Clec14a,Fancm,Nin,Dact1,Rtn1和Slc38a6列为该QTL的可能候选基因。动脉粥样硬化病变的大小与非高密度脂蛋白胆固醇水平显着相关(r = 0.254; p = 0.00016),但与当前十字架的高密度脂蛋白胆固醇水平成反比(r = -0.134; p = 0.049)。因此,我们证明了小鼠颈动脉粥样硬化的多基因控制。颈动脉病变大小与非HDL和HDL的相关性表明,遗传因素部分通过调节脂蛋白动态平衡而对颈动脉粥样硬化产生影响。

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