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Integration of Telomere Length Dynamics into Systems Biology Framework: A Review

机译:端粒长度动力学集成到系统生物学框架:审查。

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摘要

Telomere length dynamics plays a crucial role in regulation of cellular processes and cell fate. In contrast to epidemiological studies revealing the association of telomere length with age, age-related diseases, and cancers, the role of telomeres in regulation of transcriptome and epigenome and the role of genomic variations in telomere lengthening are not extensively analyzed. This is explained by the fact that experimental assays for telomere length measurement are resource consuming, and there are very few studies where high-throughput genomics, transcriptomics, and/or epigenomics experiments have been coupled with telomere length measurements. Recent development of computational approaches for assessment of telomere length from whole genome sequencing data pave a new perspective on integration of telomeres into high-throughput systems biology analysis framework. Herein, we review existing methodologies for telomere length measurement and compare them to computational approaches, as well as discuss their applications in large-scale studies on telomere length dynamics.
机译:端粒长度动力学在调节细胞过程和细胞命运中起着至关重要的作用。与流行病学研究相反,流行病学研究表明端粒长度与年龄,与年龄有关的疾病和癌症之间存在关联,但并未广泛分析端粒在转录组和表观基因组调控中的作用以及基因组变异在端粒延长中的作用。端粒长度测量的实验方法消耗资源,并且很少有研究将端粒长度测量与高通量基因组学,转录组学和/或表观基因组学实验相结合,这一事实得以解释。从全基因组测序数据评估端粒长度的计算方法的最新发展为将端粒整合到高通量系统生物学分析框架中提供了新的视角。在本文中,我们回顾了端粒长度测量的现有方法,并将其与计算方法进行了比较,并讨论了它们在端粒长度动力学的大规模研究中的应用。

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