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Uncovering Missing Heritability in Rare Diseases

机译:发现罕见疾病的遗留遗传力

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摘要

The problem of ‘missing heritability’ affects both common and rare diseases hindering: discovery, diagnosis, and patient care. The ‘missing heritability’ concept has been mainly associated with common and complex diseases where promising modern technological advances, like genome-wide association studies (GWAS), were unable to uncover the complete genetic mechanism of the disease/trait. Although rare diseases (RDs) have low prevalence individually, collectively they are common. Furthermore, multi-level genetic and phenotypic complexity when combined with the individual rarity of these conditions poses an important challenge in the quest to identify causative genetic changes in RD patients. In recent years, high throughput sequencing has accelerated discovery and diagnosis in RDs. However, despite the several-fold increase (from ~10% using traditional to ~40% using genome-wide genetic testing) in finding genetic causes of these diseases in RD patients, as is the case in common diseases—the majority of RDs are also facing the ‘missing heritability’ problem. This review outlines the key role of high throughput sequencing in uncovering genetics behind RDs, with a particular focus on genome sequencing. We review current advances and challenges of sequencing technologies, bioinformatics approaches, and resources.
机译:“遗传力缺失”问题会影响常见和罕见疾病,这些疾病会阻碍发现,诊断和患者护理。 “遗传力缺失”的概念主要与常见和复杂的疾病有关,在这些疾病中,有希望的现代技术进步(例如全基因组关联研究(GWAS))无法揭示疾病/性状的完整遗传机制。尽管罕见病(RDs)的患病率较低,但从总体上讲,它们很普遍。此外,多级遗传和表型复杂性与这些条件的个别稀有性相结合,对寻找RD患者的致病性遗传变化提出了重要挑战。近年来,高通量测序加速了RD中的发现和诊断。然而,尽管与普通疾病一样,RD患者中发现这些疾病的遗传原因的几倍增加(从使用传统基因组检测的约10%增加到使用全基因组基因检测的约40%),但大多数RD是还面临着“遗传力缺失”的问题。这篇综述概述了高通量测序在揭示RD背后的遗传学方面的关键作用,尤其着重于基因组测序。我们回顾了测序技术,生物信息学方法和资源的最新进展和挑战。

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